Miyakogusa Predicted Gene

Lj4g3v1083800.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr4
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1JC59_SOYBN 441 95.5 97.7 (tr|I1JC59) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT1G60780.1 424 89.5 96.4 | Symbols: HAP13 | Clathrin adaptor complexes medium subunit family protein | chr1:22369289-22371885 REVERSE LENGTH=428
Medicago Medtr5g033500.1 439 95.0 97.3 | clathrin assembly protein AP47, putative | HC | chr5:14425505-14431918 | 20130731
Soybean Glyma02g04280.1 441 95.5 97.7  
LJGI gnl|LJGI|TC71026 1281 99.5 99.5 similar to UniRef100_A7QY06 Cluster: Chromosome undetermined scaffold_235, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome undetermined scaffold_235, whole genome shotgun sequence - Vitis vinifera (Grape), partial (51%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj4g3v1083800.1 length: 220 aa.
IPR001392 Clathrin adaptor, mu subunit
method AccNumber shortName E-value location
Biological Process GO:0006886 intracellular protein transport    
Biological Process GO:0016192 vesicle-mediated transport    
Cellular Component GO:0030131 clathrin adaptor complex    
FPrintScan PR00314 CLATHRINADPT 1.3e-24 28-55
97-112
137-148
IPR008968 Clathrin adaptor, mu subunit, C-terminal
Molecular Function GO:0005515 protein binding    
Biological Process GO:0006886 intracellular protein transport    
Biological Process GO:0016192 vesicle-mediated transport    
Cellular Component GO:0030131 clathrin adaptor complex    
HMMPfam PF00928 Adap_comp_sub 1.8e-71 1-218
ProfileScan PS51072 MHD 84.039 1-219
superfamily SSF49447 Second 6e-70 1-219
IPR018240 Clathrin adaptor, mu subunit, conserved site
Biological Process GO:0006886 intracellular protein transport    
Biological Process GO:0016192 vesicle-mediated transport    
Cellular Component GO:0030131 clathrin adaptor complex    
PatternScan PS00991 CLAT_ADAPTOR_M_2 NA 48-62
no_ID  
Gene3D G3DSA:2.60.40.1170 no description 1.9e-41 70-183
HMMPanther PTHR11998 CLATHRIN 9.3e-142 1-220
HMMPanther PTHR11998:SF11 CLATHRIN 9.3e-142 1-220
Wolf-PSORT
Lj4g3v1083800.1	cysk 12, cyto 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj4g3v1083800.1