Miyakogusa Predicted Gene

Lj4g3v1073510.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr4
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL G7LJD2_MEDTR 398 85.8 93.3 (tr|G7LJD2) Uncharacterized protein OS=Medicago truncatula GN=MTR_8g070510 PE=2 SV=1
TAIR_pep AT4G26470.1 337 73.4 87.2 | Symbols: | Calcium-binding EF-hand family protein | chr4:13371377-13372343 FORWARD LENGTH=231
Medicago Medtr8g070510.3 398 85.8 93.3 | EF hand calcium-binding family protein | HC | chr8:29971763-29976008 | 20130731
Soybean Glyma08g33830.2 397 88.5 94.5  
LJGI gnl|LJGI|TC80412 1300 99.8 99.8 similar to UniRef100_A7Q9F2 Cluster: Chromosome chr19 scaffold_66, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr19 scaffold_66, whole genome shotgun sequence - Vitis vinifera (Grape), partial (94%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj4g3v1073510.1 length: 226 aa.
IPR002048 EF-hand domain
method AccNumber shortName E-value location
Molecular Function GO:0005509 calcium ion binding    
HMMSmart SM00054 EF-hand, 2.6 58-86
94-122
149-177
187-215
ProfileScan PS50222 EF_HAND_2 9.939 54-89
90-125
145-180
183-218
IPR011992 EF-hand-like domain
Molecular Function GO:0005509 calcium ion binding    
Gene3D G3DSA:1.10.238.10 no description 2.4e-38 20-215
HMMPfam PF13499 EF_hand_5 9.4e-09 59-116
154-211
IPR018247 EF-Hand 1, calcium-binding site
PatternScan PS00018 EF_HAND_1 NA 67-79
158-170
no_ID  
HMMPanther PTHR10891 EF-HAND 5.9e-117 19-223
HMMPanther PTHR10891:SF8 UNCHARACTERIZED 5.9e-117 19-223
superfamily SSF47473 EF-hand 8e-30 38-215
Wolf-PSORT
Lj4g3v1073510.1	nucl 4, cysk 4, cysk_nucl 4, chlo 3, cyto_nucl 3
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj4g3v1073510.1