Miyakogusa Predicted Gene

Lj4g3v0998950.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr4
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL G7LD30_MEDTR 218 64.5 69.0 (tr|G7LD30) 50S ribosomal protein L12-2 OS=Medicago truncatula GN=MTR_8g076780 PE=2 SV=1
TAIR_pep AT4G36420.1 147 58.5 68.3 | Symbols: | Ribosomal protein L12 family protein | chr4:17203718-17204257 REVERSE LENGTH=179
Medicago Medtr8g076780.2 218 64.5 69.0 | 50S ribosomal protein L7/L12 | HC | chr8:32563651-32561357 | 20130731
Soybean Glyma02g05920.1 203 59.4 66.7  
LJGI gnl|LJGI|TC58199 65.9 82.3 82.3 similar to UniRef100_A7PCZ5 Cluster: Chromosome chr17 scaffold_12, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr17 scaffold_12, whole genome shotgun sequence - Vitis vinifera (Grape), partial (88%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj4g3v0998950.1 length: 197 aa.
IPR000206 Ribosomal protein L7/L12
method AccNumber shortName E-value location
Molecular Function GO:0003735 structural constituent of ribosome    
Cellular Component GO:0005622 intracellular    
Cellular Component GO:0005840 ribosome    
Biological Process GO:0006412 translation    
HAMAP MF_00368 Ribosomal_L7_L12 18.842 53-197
IPR008932 Ribosomal protein L7/L12, oligomerisation
Molecular Function GO:0003735 structural constituent of ribosome    
Cellular Component GO:0005622 intracellular    
Cellular Component GO:0005840 ribosome    
Biological Process GO:0006412 translation    
superfamily SSF48300 Ribosomal 1.2e-09 56-132
IPR013823 Ribosomal protein L7/L12, C-terminal
Molecular Function GO:0003735 structural constituent of ribosome    
Cellular Component GO:0005622 intracellular    
Cellular Component GO:0005840 ribosome    
Biological Process GO:0006412 translation    
BlastProDom PD001326 O23238_ARATH_O23238; 8e-20 131-193
HMMPfam PF00542 Ribosomal_L12 1.4e-24 130-196
IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like
Gene3D G3DSA:3.30.1390.10 no description 6.7e-27 125-196
superfamily SSF54736 ClpS-like 2.5e-22 129-197
IPR015608 Ribosomal protein L7/L12, chloroplast
HMMPanther PTHR11809:SF6 50S 5e-68 7-197
no_ID  
HMMPanther PTHR11809 RIBOSOMAL 5e-68 7-197
Seg seg seg NA 31-41
106-127
Wolf-PSORT
Lj4g3v0998950.1	chlo 7, mito 7, chlo_mito 7
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj4g3v0998950.1