Miyakogusa Predicted Gene

Lj4g3v0537650.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr4
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1KLW4_SOYBN 1229 83.4 90.4 (tr|I1KLW4) Uncharacterized protein OS=Glycine max PE=4 SV=2
TAIR_pep AT4G02750.1 376 32.8 55.2 | Symbols: | Tetratricopeptide repeat (TPR)-like superfamily protein | chr4:1221116-1223461 REVERSE LENGTH=781
Medicago Medtr4g087150.1 1214 80.2 89.3 | PPR containing plant-like protein | HC | chr4:34147385-34144072 | 20130731
Soybean Glyma07g33060.1 1102 77.1 83.4  
LJGI --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
Lj4g3v0537650.1 length: 717 aa.
IPR002885 Pentatricopeptide repeat
method AccNumber shortName E-value location
HMMPfam PF01535 PPR 0.0052 170-198
307-327
335-360
367-391
500-529
535-560
571-595
HMMPfam PF13041 PPR_2 8.3e-12 68-114
199-247
396-442
HMMTigr TIGR00756 PPR: 0.0024 70-102
201-236
335-360
367-390
398-426
500-533
572-595
ProfileScan PS51375 PPR 7.761 67-101
36-66
102-136
199-234
168-198
235-269
333-367
270-304
396-430
369-394
497-531
466-496
532-562
568-598
IPR011990 Tetratricopeptide-like helical
Molecular Function GO:0005515 protein binding    
Gene3D G3DSA:1.25.40.10 no description 1.6e-09 278-492
no_ID  
HMMPanther PTHR24015 FAMILY 1.5e-198 21-711
HMMPanther PTHR24015:SF169PENTATRICOPEPTIDE (PPR) 1.5e-198 21-711
Wolf-PSORT
Lj4g3v0537650.1	chlo 6, mito 4, cyto 2, cyto_mito 2, mito_plas 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj4g3v0537650.1