Miyakogusa Predicted Gene

Lj4g3v0408380.1

Related links:

Predicted Sequence Links:

Genome Sequence: Lj3.0_chr4

Full length sequence(42341900 bp) Sequence Cut

Init: Term:
reverse complement

Results of Blast2 searches (The best-hits are tabulated.):

database Accession Score Iden
(%) Posi
(%) Definition

TrEMBL I1KSZ6_SOYBN 347 57.3 66.3 (tr|I1KSZ6) Uncharacterized protein OS=Glycine max PE=4 SV=2

TAIR_pep AT1G23850.1 117 25.3 46.4 | Symbols: | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G23840.1); Has 47 Blast hits to 40 proteins in 5 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 47; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr1:8425981-8427045 REVERSE LENGTH=354

Medicago Medtr1g060280.1 295 53.1 65.1 | transmembrane protein | LC | chr1:26234650-26235657 | 20130731

Soybean Glyma08g14270.1 344 56.8 65.6

LJGI gnl|LJGI|TC59708 412 82.2 82.2 similar to UniRef100_A7PMD0 Cluster: Chromosome chr14 scaffold_21, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr14 scaffold_21, whole genome shotgun sequence - Vitis vinifera (Grape), partial (9%)

A list of protein families, domains and functional sites (searches in InterPro)

Lj4g3v0408380.1 length: 348 aa.

no_ID

method AccNumber shortName E-value location

Seg seg seg NA 262-283

Wolf-PSORT

Lj4g3v0408380.1 plas 7, vacu 4, golg 2, E.R._vacu 2

PTS1 (Peroxisome targeting signal type 1)

entry_id prediction score sppta spptna fp profile

Lj4g3v0408380.1

Top Kazusa DNA Research Institute

database	Accession	Score	Iden (%)	Posi (%)	Definition
TrEMBL	I1KSZ6_SOYBN	347	57.3	66.3	(tr\|I1KSZ6) Uncharacterized protein OS=Glycine max PE=4 SV=2
TAIR_pep	AT1G23850.1	117	25.3	46.4	\| Symbols: \| unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G23840.1); Has 47 Blast hits to 40 proteins in 5 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 47; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). \| chr1:8425981-8427045 REVERSE LENGTH=354
Medicago	Medtr1g060280.1	295	53.1	65.1	\| transmembrane protein \| LC \| chr1:26234650-26235657 \| 20130731
Soybean	Glyma08g14270.1	344	56.8	65.6
LJGI	gnl\|LJGI\|TC59708	412	82.2	82.2	similar to UniRef100_A7PMD0 Cluster: Chromosome chr14 scaffold_21, whole genome shotgun sequence; n=1; Vitis vinifera\|Rep: Chromosome chr14 scaffold_21, whole genome shotgun sequence - Vitis vinifera (Grape), partial (9%)

no_ID
Lj4g3v0408380.1				length: 348 aa.
method	AccNumber	shortName	E-value	location
Seg	seg	seg	NA	262-283