Miyakogusa Predicted Gene

Lj4g3v0281060.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr4
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I3SNB2_LOTJA 176 100.0 100.0 (tr|I3SNB2) Uncharacterized protein OS=Lotus japonicus PE=4 SV=1
TAIR_pep AT5G48870.1 165 94.1 98.8 | Symbols: SAD1 | Small nuclear ribonucleoprotein family protein | chr5:19813407-19814362 FORWARD LENGTH=88
Medicago Medtr4g094600.1 175 98.9 100.0 | u6 snRNA-associated-like-Smprotein | HC | chr4:38346646-38342453 | 20130731
Soybean Glyma05g25800.2 170 95.4 97.7  
LJGI gnl|LJGI|TC64426 529 100.0 100.0 homologue to UniRef100_A7NXU4 Cluster: Chromosome chr5 scaffold_2, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr5 scaffold_2, whole genome shotgun sequence - Vitis vinifera (Grape), partial (97%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj4g3v0281060.1 length: 87 aa.
IPR001163 Ribonucleoprotein LSM domain
method AccNumber shortName E-value location
HMMPfam PF01423 LSM 6.9e-18 14-80
IPR006649 Ribonucleoprotein LSM domain, eukaryotic/archaea-type
HMMSmart SM00651 snRNP 8e-21 12-80
IPR010920 Like-Sm (LSM) domain
superfamily SSF50182 Sm-like 7.7e-19 8-87
no_ID  
Gene3D G3DSA:2.30.30.100 no description 4e-27 8-82
HMMPanther PTHR20971 U6 2.9e-57 1-85
Wolf-PSORT
Lj4g3v0281060.1	cyto 7, chlo 2, extr 2, golg 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj4g3v0281060.1 Not targeted -64.453 -8.283 -4.902 92.65% -51.269