Miyakogusa Predicted Gene

Lj4g3v0153950.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr4
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1KNB6_SOYBN 2342 86.4 90.8 (tr|I1KNB6) Uncharacterized protein OS=Glycine max PE=4 SV=2
TAIR_pep AT1G61850.2 1788 68.7 80.5 | Symbols: | phospholipases;galactolipases | chr1:22856317-22862225 FORWARD LENGTH=1309
Medicago Medtr4g131850.1 2294 84.3 90.0 | phospholipase A 2A | HC | chr4:55027829-55039065 | 20130731
Soybean Glyma17g01850.1 2177 86.0 90.6  
LJGI gnl|LJGI|TC71204 1923 99.2 99.2 similar to UniRef100_A7QUL2 Cluster: Chromosome chr10 scaffold_179, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr10 scaffold_179, whole genome shotgun sequence - Vitis vinifera (Grape), partial (24%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj4g3v0153950.1 length: 1325 aa.
IPR000225 Armadillo
method AccNumber shortName E-value location
Molecular Function GO:0005515 protein binding    
HMMPfam PF00514 Arm 2.8e-06 357-394
IPR001611 Leucine-rich repeat
Molecular Function GO:0005515 protein binding    
ProfileScan PS51450 LRR 4.893 196-217
219-240
242-262
265-286
287-308
IPR002641 Patatin/Phospholipase A2-related
Biological Process GO:0006629 lipid metabolic process    
HMMPfam PF01734 Patatin 1.1e-21 541-783
IPR003591 Leucine-rich repeat, typical subtype
HMMSmart SM00369 Leucine-rich 12 194-215
217-240
263-286
IPR011989 Armadillo-like helical
Gene3D G3DSA:1.25.10.10 no description 5.2e-23 345-529
IPR016024 Armadillo-type fold
Molecular Function GO:0005488 binding    
superfamily SSF48371 ARM 8.1e-23 337-546
IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase
Biological Process GO:0008152 metabolic process    
superfamily SSF52151 FabD/lysophospholipase-like 1.3e-49 535-915
no_ID  
Gene3D G3DSA:3.40.1090.10 no description 1.7e-64 534-898
Gene3D G3DSA:3.80.10.10 no description 1.4e-27 169-306
HMMPanther PTHR24185 FAMILY 9.5e-40 537-866
HMMPfam PF13855 LRR_8 7.4e-07 195-253
Seg seg seg NA 30-52
388-403
486-501
superfamily SSF52058 L 2.3e-28 68-298
Wolf-PSORT
Lj4g3v0153950.1	nucl 6, chlo 3, cysk_nucl 3, cyto 2, vacu 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj4g3v0153950.1