Miyakogusa Predicted Gene

Lj4g3v0153680.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr4
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL G7JJ74_MEDTR 1354 75.2 82.2 (tr|G7JJ74) tRNA wybutosine-synthesizing protein 2/3/4 OS=Medicago truncatula GN=MTR_4g132120 PE=4 SV=1
TAIR_pep AT4G04670.1 917 55.4 67.4 | Symbols: | Met-10+ like family protein / kelch repeat-containing protein | chr4:2367603-2371990 FORWARD LENGTH=995
Medicago Medtr4g132120.1 1354 75.2 82.2 | tRNA wybutosine-synthesizing 2/3/4-like protein | HC | chr4:55200876-55193725 | 20130731
Soybean Glyma07g39030.1 1244 71.4 77.7  
LJGI gnl|LJGI|CB829000 1033 99.6 99.6 weakly similar to UniRef100_A7QZP1 Cluster: Chromosome chr10 scaffold_282, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr10 scaffold_282, whole genome shotgun sequence - Vitis vinifera (Grape), partial (11%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj4g3v0153680.1 length: 877 aa.
IPR003402 tRNA transferase Trm5/Tyw2
method AccNumber shortName E-value location
Molecular Function GO:0016740 transferase activity    
HMMPfam PF02475 Met_10 1e-32 616-812
IPR003827 tRNA wybutosine-synthesizing protein
HMMPfam PF02676 TYW3 6.3e-07 1-45
superfamily SSF111278 SSo0622-like 1.6e-08 1-44
IPR006652 Kelch repeat type 1
Molecular Function GO:0005515 protein binding    
HMMPfam PF01344 Kelch_1 3.4e-09 221-263
HMMSmart SM00612 no description 0.19 182-232
233-280
283-332
IPR015915 Kelch-type beta propeller
Molecular Function GO:0005515 protein binding    
Gene3D G3DSA:2.120.10.80 no description 1.2e-54 127-390
no_ID  
Gene3D G3DSA:3.30.1960.10 no description 1.5e-06 1-41
Gene3D G3DSA:3.40.50.150 no description 1.3e-56 678-873
HMMPanther PTHR23245 UNCHARACTERIZED 0 1-877
HMMPanther PTHR23245:SF27 SUBFAMILY 0 1-877
HMMPfam PF13418 Kelch_4 5.3e-10 170-210
272-312
Seg seg seg NA 42-54
84-99
379-390
575-589
superfamily SSF117281 Kelch 9.4e-59 126-391
superfamily SSF53335 S-adenosyl-L-methionine-dependent 2.7e-59 604-875
Wolf-PSORT
Lj4g3v0153680.1	cyto 5, nucl 3, cyto_plas 3, vacu 2, E.R. 2, nucl_plas 2, E.R._vacu 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj4g3v0153680.1