Miyakogusa Predicted Gene

Lj4g3v0037530.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr4
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1KNQ8_SOYBN 1760 73.7 78.2 (tr|I1KNQ8) Uncharacterized protein OS=Glycine max PE=4 SV=2
TAIR_pep AT2G02480.1 1152 53.8 64.1 | Symbols: STI | AAA-type ATPase family protein | chr2:661093-665337 FORWARD LENGTH=1218
Medicago Medtr4g134530.1 1374 72.1 78.2 | DNA polymerase III subunit gamma/tau | HC | chr4:56342192-56348822 | 20130731
Soybean Glyma07g40180.1 1690 71.4 75.9  
LJGI gnl|LJGI|TC82655 1384 99.9 99.9 similar to UniRef100_A7QCE6 Cluster: Chromosome undetermined scaffold_77, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome undetermined scaffold_77, whole genome shotgun sequence - Vitis vinifera (Grape), partial (12%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj4g3v0037530.1 length: 1250 aa.
IPR003593 AAA+ ATPase domain
method AccNumber shortName E-value location
Molecular Function GO:0000166 nucleotide binding    
Molecular Function GO:0017111 nucleoside-triphosphatase activity    
HMMSmart SM00382 ATPases 0.0018 504-659
IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal
Molecular Function GO:0003677 DNA binding    
Biological Process GO:0006260 DNA replication    
superfamily SSF48019 DNA 7.3e-08 716-822
IPR012763 DNA polymerase III, subunit gamma/ tau
Molecular Function GO:0003887 DNA-directed DNA polymerase activity    
Molecular Function GO:0005524 ATP binding    
Biological Process GO:0006260 DNA replication    
Cellular Component GO:0009360 DNA polymerase III complex    
HMMTigr TIGR02397 dnaX_nterm: 6.3e-113 472-822
IPR022754 DNA polymerase III, gamma subunit, domain III
Molecular Function GO:0003887 DNA-directed DNA polymerase activity    
HMMPfam PF12169 DNA_pol3_gamma3 4.7e-09 701-826
IPR027417 P-loop containing nucleoside triphosphate hydrolase
superfamily SSF52540 P-loop 1.1e-43 494-710
no_ID  
Coil coil coiled-coil NA 781-812
Gene3D G3DSA:1.10.8.60 no description 3.3e-22 637-711
Gene3D G3DSA:1.20.272.10 no description 1.7e-05 712-822
Gene3D G3DSA:3.40.50.300 no description 2.7e-47 483-636
HMMPanther PTHR11669 REPLICATION 9.4e-107 297-1009
HMMPfam PF13177 DNA_pol3_delta2 1.2e-30 487-648
Seg seg seg NA 35-46
106-133
253-272
313-323
583-588
831-845
897-909
Wolf-PSORT
Lj4g3v0037530.1	nucl 12, cyto 1, mito 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj4g3v0037530.1