Miyakogusa Predicted Gene

Lj3g3v3553980.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr3
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)
Posi
(%)
Definition
TrEMBL I1LIP2_SOYBN 280 73.2 77.8 (tr|I1LIP2) Uncharacterized protein OS=Glycine max PE=4 SV=2
TAIR_pep AT2G47450.1 197 57.8 69.4 | Symbols: CAO, CPSRP43 | chloroplast signal recognition particle component (CAO) | chr2:19472781-19473902 FORWARD LENGTH=373
Medicago Medtr4g075710.1 263 68.8 76.7 | signal recognition particle 43 kDa protein | HC | chr4:28952962-28954435 | 20130731
Soybean Glyma11g10310.1 242 72.9 77.7  
LJGI gnl|LJGI|TC71057 1160 100.0 100.0 similar to UniRef100_A7P8N5 Cluster: Chromosome chr3 scaffold_8, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr3 scaffold_8, whole genome shotgun sequence - Vitis vinifera (Grape), partial (78%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj3g3v3553980.1 length: 194 aa.
IPR000953 Chromo domain/shadow
method AccNumber shortName E-value location
HMMSmart SM00298 Chromatin 1.7e-09 74-124
125-175
ProfileScan PS50013 CHROMO_2 11.453 126-182
IPR002110 Ankyrin repeat
Molecular Function GO:0005515 protein binding    
ProfileScan PS50088 ANK_REPEAT 10.312 1-31
IPR016197 Chromo domain-like
superfamily SSF54160 Chromo 6e-10 126-170
71-120
IPR020683 Ankyrin repeat-containing domain
Gene3D G3DSA:1.25.40.20 no description 1.8e-08 3-42
ProfileScan PS50297 ANK_REP_REGION 13.310 1-40
superfamily SSF48403 Ankyrin 2.6e-08 3-43
IPR023780 Chromo domain
HMMPfam PF00385 Chromo 1.7e-09 128-172
no_ID  
Gene3D G3DSA:2.40.50.40 no description 7e-11 77-121
124-178
HMMPfam PF13857 Ank_5 1.2e-07 3-40
Seg seg seg NA 56-70
126-137
Wolf-PSORT
Lj3g3v3553980.1	chlo 8, cyto 5
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj3g3v3553980.1