Miyakogusa Predicted Gene

Lj3g3v3359730.2

Related links:

Predicted Sequence Links:

Genome Sequence: Lj3.0_chr3

Full length sequence(45610869 bp) Sequence Cut

Init: Term:
reverse complement

Results of Blast2 searches (The best-hits are tabulated.):

database Accession Score Iden
(%) Posi
(%) Definition

TrEMBL I1JZE1_SOYBN 766 88.3 93.4 (tr|I1JZE1) Methylenetetrahydrofolate reductase OS=Glycine max PE=3 SV=1

TAIR_pep AT2G44160.1 700 80.6 91.7 | Symbols: MTHFR2 | methylenetetrahydrofolate reductase 2 | chr2:18262301-18265185 FORWARD LENGTH=594

Medicago Medtr1g040105.1 767 89.9 96.7 | methylenetetrahydrofolate reductase | HC | chr1:14723769-14718084 | 20130731

Soybean Glyma04g43540.1 766 88.3 93.4

LJGI gnl|LJGI|TC57460 1215 91.6 91.6 similar to UniRef100_A5ATB7 Cluster: Methylenetetrahydrofolate reductase; n=1; Vitis vinifera|Rep: Methylenetetrahydrofolate reductase - Vitis vinifera (Grape), partial (51%)

A list of protein families, domains and functional sites (searches in InterPro)

Lj3g3v3359730.2 length: 415 aa.

IPR003171 Methylenetetrahydrofolate reductase

method AccNumber shortName E-value location

Molecular Function GO:0004489 methylenetetrahydrofolate reductase (NADPH) activity

Biological Process GO:0006555 methionine metabolic process

Biological Process GO:0055114 oxidation-reduction process

HMMPfam PF02219 MTHFR 6.5e-122 13-303

IPR004621 Eukaryotic-type methylenetetrahydrofolate reductase

Molecular Function GO:0004489 methylenetetrahydrofolate reductase (NADPH) activity

Biological Process GO:0006555 methionine metabolic process

Biological Process GO:0055114 oxidation-reduction process

HMMTigr TIGR00677 fadh2_euk: 1e-147 19-307

no_ID

Gene3D G3DSA:3.20.20.220 no description 3e-121 12-307

HMMPanther PTHR21091 METHYLTETRAHYDROFOLATE:HOMOCYSTEINE 4.6e-190 20-405

HMMPanther PTHR21091:SF1 METHYLENETETRAHYDROFOLATE 4.6e-190 20-405

Seg seg seg NA 9-13

superfamily SSF51730 FAD-linked 2.2e-92 6-307

Wolf-PSORT

Lj3g3v3359730.2 cyto 6, cysk 3, cyto_nucl 3, cyto_E.R. 3

PTS1 (Peroxisome targeting signal type 1)

entry_id prediction score sppta spptna fp profile

Lj3g3v3359730.2

Top Kazusa DNA Research Institute

database	Accession	Score	Iden (%)	Posi (%)	Definition
TrEMBL	I1JZE1_SOYBN	766	88.3	93.4	(tr\|I1JZE1) Methylenetetrahydrofolate reductase OS=Glycine max PE=3 SV=1
TAIR_pep	AT2G44160.1	700	80.6	91.7	\| Symbols: MTHFR2 \| methylenetetrahydrofolate reductase 2 \| chr2:18262301-18265185 FORWARD LENGTH=594
Medicago	Medtr1g040105.1	767	89.9	96.7	\| methylenetetrahydrofolate reductase \| HC \| chr1:14723769-14718084 \| 20130731
Soybean	Glyma04g43540.1	766	88.3	93.4
LJGI	gnl\|LJGI\|TC57460	1215	91.6	91.6	similar to UniRef100_A5ATB7 Cluster: Methylenetetrahydrofolate reductase; n=1; Vitis vinifera\|Rep: Methylenetetrahydrofolate reductase - Vitis vinifera (Grape), partial (51%)

IPR003171	Methylenetetrahydrofolate reductase
Lj3g3v3359730.2				length: 415 aa.
method	AccNumber	shortName	E-value	location
Molecular Function	GO:0004489	methylenetetrahydrofolate reductase (NADPH) activity
Biological Process	GO:0006555	methionine metabolic process
Biological Process	GO:0055114	oxidation-reduction process
HMMPfam	PF02219	MTHFR	6.5e-122	13-303
IPR004621	Eukaryotic-type methylenetetrahydrofolate reductase
Molecular Function	GO:0004489	methylenetetrahydrofolate reductase (NADPH) activity
Biological Process	GO:0006555	methionine metabolic process
Biological Process	GO:0055114	oxidation-reduction process
HMMTigr	TIGR00677	fadh2_euk:	1e-147	19-307
no_ID
Gene3D	G3DSA:3.20.20.220	no description	3e-121	12-307
HMMPanther	PTHR21091	METHYLTETRAHYDROFOLATE:HOMOCYSTEINE	4.6e-190	20-405
HMMPanther	PTHR21091:SF1	METHYLENETETRAHYDROFOLATE	4.6e-190	20-405
Seg	seg	seg	NA	9-13
superfamily	SSF51730	FAD-linked	2.2e-92	6-307