Miyakogusa Predicted Gene

Lj3g3v3312800.2
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr3
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL B9T479_RICCO 1036 70.9 78.7 (tr|B9T479) ATP binding protein, putative OS=Ricinus communis GN=RCOM_0068780 PE=4 SV=1
TAIR_pep AT1G05910.1 774 79.5 87.5 | Symbols: | cell division cycle protein 48-related / CDC48-related | chr1:1790796-1796503 FORWARD LENGTH=1210
Medicago Medtr4g067100.1 908 89.8 91.8 | ATPase family AAA domain protein | HC | chr4:25295979-25287676 | 20130731
Soybean Glyma12g05680.1 913 89.8 92.2  
LJGI gnl|LJGI|DC593327 1116 98.6 98.6 similar to UniRef100_Q93ZM5 Cluster: At1g05910/T20M3_16; n=1; Arabidopsis thaliana|Rep: At1g05910/T20M3_16 - Arabidopsis thaliana (Mouse-ear cress), partial (16%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj3g3v3312800.2 length: 749 aa.
IPR003593 AAA+ ATPase domain
method AccNumber shortName E-value location
Molecular Function GO:0000166 nucleotide binding    
Molecular Function GO:0017111 nucleoside-triphosphatase activity    
HMMSmart SM00382 ATPases 7.9e-20 421-562
IPR003959 ATPase, AAA-type, core
Molecular Function GO:0005524 ATP binding    
HMMPfam PF00004 AAA 1.4e-39 425-559
IPR003960 ATPase, AAA-type, conserved site
Molecular Function GO:0005524 ATP binding    
PatternScan PS00674 AAA NA 530-548
IPR027417 P-loop containing nucleoside triphosphate hydrolase
superfamily SSF52540 P-loop 1.2e-61 385-648
no_ID  
Gene3D G3DSA:1.10.8.60 no description 4e-18 569-650
Gene3D G3DSA:3.40.50.300 no description 1.5e-55 384-568
HMMPanther PTHR23069 TAT-BINDING 1.9e-248 6-703
HMMPanther PTHR23069:SF0 SUBFAMILY 1.9e-248 6-703
Seg seg seg NA 41-52
180-237
296-309
317-326
Wolf-PSORT
Lj3g3v3312800.2	cyto 6, nucl 5, chlo 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj3g3v3312800.2