Miyakogusa Predicted Gene

Lj3g3v3154040.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr3
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL Q9ZRY4_LOTJA 1344 98.8 98.8 (tr|Q9ZRY4) NDX1 homeobox protein OS=Lotus japonicus GN=ndx1 PE=2 SV=1
TAIR_pep AT4G03090.2 402 40.3 54.9 | Symbols: | sequence-specific DNA binding;sequence-specific DNA binding transcription factors | chr4:1366495-1370910 REVERSE LENGTH=879
Medicago Medtr2g096290.1 783 62.0 71.5 | NDX1 homeobox protein | HC | chr2:41127648-41136119 | 20130731
Soybean Glyma15g04700.1 865 67.0 75.1  
LJGI gnl|LJGI|TC64236 3917 99.9 99.9 UniRef100_Q9ZRY4 Cluster: NDX1 homeobox protein; n=1; Lotus japonicus|Rep: NDX1 homeobox protein - Lotus japonicus, complete
A list of protein families, domains and functional sites (searches in InterPro)
Lj3g3v3154040.1 length: 658 aa.
IPR001356 Homeodomain
method AccNumber shortName E-value location
Molecular Function GO:0003700 sequence-specific DNA binding transcription factor activity    
Biological Process GO:0006355 regulation of transcription, DNA-dependent    
Molecular Function GO:0043565 sequence-specific DNA binding    
HMMSmart SM00389 Homeodomain 2.9e-06 430-499
ProfileScan PS50071 HOMEOBOX_2 11.143 428-495
IPR009057 Homeodomain-like
Molecular Function GO:0003677 DNA binding    
Gene3D G3DSA:1.10.10.60 no description 0.00041 416-492
superfamily SSF46689 Homeodomain-like 9.4e-06 431-504
no_ID  
Seg seg seg NA 381-388
Wolf-PSORT
Lj3g3v3154040.1	nucl 6, E.R._plas 4, plas 3.5, E.R. 3.5
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj3g3v3154040.1