Miyakogusa Predicted Gene

Lj3g3v2990300.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr3
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL B7FI29_MEDTR 413 90.0 92.7 (tr|B7FI29) Uncharacterized protein OS=Medicago truncatula PE=2 SV=1
TAIR_pep AT5G22360.1 381 82.8 89.6 | Symbols: ATVAMP714, VAMP714 | vesicle-associated membrane protein 714 | chr5:7404379-7405654 REVERSE LENGTH=221
Medicago Medtr4g052550.1 413 90.0 92.7 | synaptobrevin-like protein | HC | chr4:19068456-19063628 | 20130731
Soybean Glyma12g09680.1 402 86.8 90.5  
LJGI gnl|LJGI|TC80022 924 99.8 99.8 homologue to UniRef100_A1Z1S4 Cluster: Synaptobrevin-like protein; n=1; Brassica juncea|Rep: Synaptobrevin-like protein - Brassica juncea (Leaf mustard) (Indian mustard), partial (68%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj3g3v2990300.1 length: 220 aa.
IPR001388 Synaptobrevin
method AccNumber shortName E-value location
Cellular Component GO:0016021 integral to membrane    
Biological Process GO:0016192 vesicle-mediated transport    
FPrintScan PR00219 SYNAPTOBREVN 3.9e-12 131-150
151-170
187-206
HMMPfam PF00957 Synaptobrevin 4e-30 124-211
PatternScan PS00417 SYNAPTOBREVIN NA 144-163
ProfileScan PS50892 V_SNARE 17.911 126-186
IPR010908 Longin domain
Gene3D G3DSA:3.30.450.50 no description 2.3e-37 1-108
HMMPfam PF13774 Longin 2.4e-24 28-109
ProfileScan PS50859 LONGIN 33.056 7-111
IPR011012 Longin-like domain
Biological Process GO:0006810 transport    
superfamily SSF64356 SNARE-like 4.5e-34 2-119
no_ID  
Gene3D G3DSA:1.10.3840.10 no description 3e-35 109-210
HMMPanther PTHR21136 SNARE 4e-104 1-212
HMMPanther PTHR21136:SF8 VAMP-7 4e-104 1-212
Seg seg seg NA 190-202
Wolf-PSORT
Lj3g3v2990300.1	chlo 7, cyto 2, vacu 2, nucl 1, E.R. 1, golg 1, cyto_pero 1, cyto_plas 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj3g3v2990300.1