Miyakogusa Predicted Gene

Lj3g3v2949660.1

Related links:

Predicted Sequence Links:

Genome Sequence: Lj3.0_chr3

Full length sequence(45610869 bp) Sequence Cut

Init: Term:
reverse complement

Results of Blast2 searches (The best-hits are tabulated.):

database Accession Score Iden
(%) Posi
(%) Definition

TrEMBL G7JH90_MEDTR 469 57.8 70.2 (tr|G7JH90) 5'-3' exoribonuclease OS=Medicago truncatula GN=MTR_4g051920 PE=4 SV=1

TAIR_pep AT5G42540.1 263 38.4 53.3 | Symbols: XRN2, AtXRN2 | exoribonuclease 2 | chr5:17007513-17014534 FORWARD LENGTH=1012

Medicago Medtr4g051920.1 465 57.4 70.4 | 5'-3' exoribonuclease | HC | chr4:18782027-18788114 | 20130731

Soybean Glyma12g09870.1 384 66.6 80.1

LJGI --No_Hits--

A list of protein families, domains and functional sites (searches in InterPro)

Lj3g3v2949660.1 length: 431 aa.

IPR027073 5'-3' exoribonuclease

method AccNumber shortName E-value location

HMMPanther PTHR12341 5'->3' 7.6e-83 15-202

Wolf-PSORT

Lj3g3v2949660.1 nucl 13

PTS1 (Peroxisome targeting signal type 1)

entry_id prediction score sppta spptna fp profile

Lj3g3v2949660.1

Top Kazusa DNA Research Institute

database	Accession	Score	Iden (%)	Posi (%)	Definition
TrEMBL	G7JH90_MEDTR	469	57.8	70.2	(tr\|G7JH90) 5'-3' exoribonuclease OS=Medicago truncatula GN=MTR_4g051920 PE=4 SV=1
TAIR_pep	AT5G42540.1	263	38.4	53.3	\| Symbols: XRN2, AtXRN2 \| exoribonuclease 2 \| chr5:17007513-17014534 FORWARD LENGTH=1012
Medicago	Medtr4g051920.1	465	57.4	70.4	\| 5'-3' exoribonuclease \| HC \| chr4:18782027-18788114 \| 20130731
Soybean	Glyma12g09870.1	384	66.6	80.1
LJGI	--No_Hits--

IPR027073	5'-3' exoribonuclease
Lj3g3v2949660.1				length: 431 aa.
method	AccNumber	shortName	E-value	location
HMMPanther	PTHR12341	5'->3'	7.6e-83	15-202