| database | Accession | Score | Iden (%) |
Posi (%) |
Definition |
|---|---|---|---|---|---|
| TrEMBL | G7JTD3_MEDTR | 640 | 69.5 | 82.0 | (tr|G7JTD3) Pentatricopeptide repeat-containing protein OS=Medicago truncatula GN=MTR_4g021220 PE=4 SV=1 |
| TAIR_pep | AT5G47360.1 | 348 | 43.0 | 58.1 | | Symbols: | Tetratricopeptide repeat (TPR)-like superfamily protein | chr5:19214445-19215878 REVERSE LENGTH=477 |
| Medicago | Medtr4g021220.1 | 640 | 69.5 | 82.0 | | PPR containing plant-like protein | HC | chr4:6857254-6858736 | 20130731 |
| Soybean | Glyma08g26050.1 | 638 | 68.0 | 78.1 | |
| LJGI | gnl|LJGI|FS334482 | 1088 | 100.0 | 100.0 | weakly similar to UniRef100_Q9LVS3 Cluster: Similarity to salt-inducible protein; n=1; Arabidopsis thaliana|Rep: Similarity to salt-inducible protein - Arabidopsis thaliana (Mouse-ear cress), partial (22%) |
| Lj3g3v2810110.1 | length: 480 aa. | |||
| IPR002885 | Pentatricopeptide repeat | |||
|---|---|---|---|---|
| method | AccNumber | shortName | E-value | location |
| HMMPfam | PF01535 | PPR | 0.019 | 341-365 |
| HMMPfam | PF12854 | PPR_1 | 1.3e-07 | 159-191 |
| HMMPfam | PF13041 | PPR_2 | 1.4e-11 | 197-246 268-317 |
| HMMTigr | TIGR00756 | PPR: | 0.00035 | 165-198 200-233 237-270 271-304 310-337 341-374 |
| ProfileScan | PS51375 | PPR | 6.818 | 163-197 128-162 198-232 233-267 269-303 304-338 342-372 410-444 373-407 |
| IPR011990 | Tetratricopeptide-like helical | |||
| Molecular Function | GO:0005515 | protein binding | ||
| Gene3D | G3DSA:1.25.40.10 | no description | 7.3e-06 | 235-367 |
| no_ID | ||||
| HMMPanther | PTHR24015 | FAMILY | 2e-86 | 45-442 |
| HMMPanther | PTHR24015:SF0 | SUBFAMILY | 2e-86 | 45-442 |
| Seg | seg | seg | NA | 250-261 406-419 |
| superfamily | SSF48452 | TPR-like | 5.4e-09 | 269-387 |
Lj3g3v2810110.1 chlo 9, nucl 2, mito 1.5, cyto_mito 1.5, nucl_plas 1.5
| entry_id | prediction | score | sppta | spptna | fp | profile |
|---|---|---|---|---|---|---|
| Lj3g3v2810110.1 |