Miyakogusa Predicted Gene

Lj3g3v2576350.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr3
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL K7N2T3_SOYBN 227 32.5 45.3 (tr|K7N2T3) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT1G49480.1 62.8 34.7 55.8 | Symbols: RTV1 | related to vernalization1 1 | chr1:18314596-18315460 REVERSE LENGTH=226
Medicago Medtr6g061070.1 95.1 27.7 48.2 | B3 DNA-binding domain protein | LC | chr6:21113921-21116898 | 20130731
Soybean Glyma10g42770.1 119 31.0 47.2  
LJGI gnl|LJGI|BP038008 111 80.1 80.1 similar to UniRef100_A4AC32 Cluster: Transferase; n=1; Congregibacter litoralis KT71|Rep: Transferase - Congregibacter litoralis KT71, partial (6%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj3g3v2576350.1 length: 487 aa.
IPR003340 B3 DNA binding domain
method AccNumber shortName E-value location
Molecular Function GO:0003677 DNA binding    
Biological Process GO:0006355 regulation of transcription, DNA-dependent    
HMMPfam PF02362 B3 1.5e-14 251-330
396-480
HMMSmart SM01019 B3 1.9e-12 8-107
244-340
393-486
ProfileScan PS50863 B3 12.858 7-107
244-340
390-484
IPR015300 DNA-binding pseudobarrel domain
Gene3D G3DSA:2.40.330.10 no description 1.3e-18 3-105
238-330
386-480
superfamily SSF101936 DNA-binding 5.9e-10 387-486
239-346
2-110
no_ID  
Seg seg seg NA 116-147
167-182
Wolf-PSORT
Lj3g3v2576350.1	nucl 11, chlo 1, plas 1, cysk 1, cysk_plas 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj3g3v2576350.1