Miyakogusa Predicted Gene

Lj3g3v2476570.2
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr3
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL K7KZU1_SOYBN 3202 77.7 85.9 (tr|K7KZU1) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT2G46560.1 1478 42.5 57.5 | Symbols: | transducin family protein / WD-40 repeat family protein | chr2:19115570-19125856 REVERSE LENGTH=2513
Medicago Medtr8g027425.1 2950 73.7 82.2 | transducin family protein/WD-40 repeat protein | HC | chr8:9694798-9709652 | 20130731
Soybean Glyma16g02620.1 2999 73.5 81.0  
LJGI gnl|LJGI|FS343962 1174 99.7 99.7  
A list of protein families, domains and functional sites (searches in InterPro)
Lj3g3v2476570.2 length: 2051 aa.
IPR001680 WD40 repeat
method AccNumber shortName E-value location
Molecular Function GO:0005515 protein binding    
HMMPfam PF00400 WD40 0.036 251-292
HMMSmart SM00320 WD40 0.39 90-132
242-292
489-531
703-763
775-820
IPR015943 WD40/YVTN repeat-like-containing domain
Molecular Function GO:0005515 protein binding    
Gene3D G3DSA:2.130.10.10 no description 6.2e-09 749-868
IPR017986 WD40-repeat-containing domain
Molecular Function GO:0005515 protein binding    
superfamily SSF50978 WD40 4e-06 89-873
60-324
IPR022033 RAVE complex protein Rav1 C-terminal
HMMPfam PF12234 Rav1p_C 1.5e-67 993-1419
no_ID  
HMMPanther PTHR13950 RABCONNECTIN-RELATED 0 104-1949
HMMPanther PTHR13950:SF8 SUBFAMILY 0 104-1949
Seg seg seg NA 2-28
1176-1181
1326-1335
1627-1636
Wolf-PSORT
Lj3g3v2476570.2	nucl 6, vacu 3, cysk_nucl 3, nucl_plas 3
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj3g3v2476570.2