Miyakogusa Predicted Gene

Lj3g3v2200290.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr3
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I3SMM8_LOTJA 300 86.8 86.8 (tr|I3SMM8) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1
TAIR_pep AT1G15340.1 152 68.0 85.0 | Symbols: MBD10 | methyl-CPG-binding domain 10 | chr1:5275895-5277474 REVERSE LENGTH=384
Medicago Medtr4g010210.1 140 35.0 42.3 | methyl-CpG-binding domain protein | LC | chr4:2290642-2289557 | 20130731
Soybean Glyma15g01040.1 166 82.3 89.6  
LJGI gnl|LJGI|TC64013 2185 99.6 99.6 similar to UniRef100_A7PF70 Cluster: Chromosome chr11 scaffold_13, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr11 scaffold_13, whole genome shotgun sequence - Vitis vinifera (Grape), partial (23%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj3g3v2200290.1 length: 374 aa.
IPR001739 Methyl-CpG DNA binding
method AccNumber shortName E-value location
Molecular Function GO:0003677 DNA binding    
Cellular Component GO:0005634 nucleus    
Gene3D G3DSA:3.30.890.10 no description 8e-16 14-100
HMMPfam PF01429 MBD 1.2e-12 14-77
ProfileScan PS50982 MBD 12.764 7-78
IPR016177 DNA-binding, integrase-type
Molecular Function GO:0003677 DNA binding    
superfamily SSF54171 DNA-binding 1.4e-23 6-108
no_ID  
Seg seg seg NA 102-114
117-134
170-183
232-243
294-305
Wolf-PSORT
Lj3g3v2200290.1	nucl 10, cyto 3
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj3g3v2200290.1