Miyakogusa Predicted Gene
- Lj3g3v1403900.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr3
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
A5BG18_VITVI |
144 |
44.9 |
58.9 |
(tr|A5BG18) Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_015896 PE=4 SV=1 |
| TAIR_pep |
AT3G17450.1 |
108 |
36.5 |
53.5 |
| Symbols: | hAT dimerisation domain-containing protein | chr3:5972793-5975684 REVERSE LENGTH=877 |
| Medicago |
--No_Hits--
|
|
|
|
|
| Soybean |
Glyma15g21390.1 |
102 |
34.6 |
54.7 |
|
| LJGI |
--No_Hits--
|
|
|
|
|
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj3g3v1403900.1 |
length: 158 aa. |
| IPR007021 |
Domain of unknown function DUF659 |
| method |
AccNumber |
shortName |
E-value |
location |
| HMMPfam |
PF04937 |
DUF659 |
1.8e-34 |
1-105 |
| IPR012337 |
Ribonuclease H-like domain |
| Molecular Function |
GO:0003676 |
nucleic acid binding |
|
|
| superfamily |
SSF53098 |
Ribonuclease |
1.7e-11 |
26-158 |
| no_ID |
|
| HMMPanther |
PTHR32166 |
FAMILY |
1.2e-53 |
1-158 |
| HMMPanther |
PTHR32166:SF0 |
SUBFAMILY |
1.2e-53 |
1-158 |
| Seg |
seg |
seg |
NA |
38-50 |
- Wolf-PSORT
Lj3g3v1403900.1 cyto 7, nucl 3, chlo 1, mito 1, plas 1, extr 1, chlo_mito 1, mito_plas 1
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj3g3v1403900.1 |
|