Miyakogusa Predicted Gene

Lj3g3v1149140.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr3
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1LTU5_SOYBN 828 92.0 94.3 (tr|I1LTU5) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT2G27600.1 788 86.4 91.7 | Symbols: SKD1, VPS4, ATSKD1 | AAA-type ATPase family protein | chr2:11781226-11783730 FORWARD LENGTH=435
Medicago Medtr2g086160.1 827 91.8 93.2 | AAA-type ATPase family protein | HC | chr2:36237293-36231516 | 20130731
Soybean Glyma12g30910.1 828 92.0 94.3  
LJGI gnl|LJGI|TC57709 2581 100.0 100.0 homologue to UniRef100_A7R0D5 Cluster: Chromosome chr6 scaffold_305, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr6 scaffold_305, whole genome shotgun sequence - Vitis vinifera (Grape), complete
A list of protein families, domains and functional sites (searches in InterPro)
Lj3g3v1149140.1 length: 433 aa.
IPR003593 AAA+ ATPase domain
method AccNumber shortName E-value location
Molecular Function GO:0000166 nucleotide binding    
Molecular Function GO:0017111 nucleoside-triphosphatase activity    
HMMSmart SM00382 ATPases 1.8e-19 162-298
IPR003959 ATPase, AAA-type, core
Molecular Function GO:0005524 ATP binding    
HMMPfam PF00004 AAA 2.5e-44 167-296
IPR003960 ATPase, AAA-type, conserved site
Molecular Function GO:0005524 ATP binding    
PatternScan PS00674 AAA NA 268-287
IPR007330 MIT
HMMPfam PF04212 MIT 1e-21 7-72
HMMSmart SM00745 Microtubule 3.1e-25 2-79
IPR015415 Vps4 oligomerisation, C-terminal
HMMPfam PF09336 Vps4_C 7.4e-25 365-430
IPR027417 P-loop containing nucleoside triphosphate hydrolase
superfamily SSF52540 P-loop 1.1e-61 124-430
no_ID  
Gene3D G3DSA:1.10.8.60 no description 4.9e-11 305-412
Gene3D G3DSA:1.20.58.280 no description 9.3e-28 2-75
Gene3D G3DSA:3.40.50.300 no description 4.4e-68 121-304
HMMPanther PTHR23074 AAA 0 1-433
HMMPanther PTHR23074:SF4 AAA-FAMILY 0 1-433
Seg seg seg NA 92-108
superfamily SSF116846 MIT 1e-24 1-101
Wolf-PSORT
Lj3g3v1149140.1	nucl 7, cyto 4, nucl_plas 4
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj3g3v1149140.1