Miyakogusa Predicted Gene
- Lj3g3v1061180.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr3
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
M4Y1F6_GOSHI |
189 |
58.3 |
66.1 |
(tr|M4Y1F6) Cotton galactosyltransferase 1 OS=Gossypium hirsutum GN=GalT1 PE=2 SV=1 |
| TAIR_pep |
AT1G53290.1 |
162 |
66.4 |
78.2 |
| Symbols: | Galactosyltransferase family protein | chr1:19871353-19873251 FORWARD LENGTH=345 |
| Medicago |
Medtr2g078030.2 |
199 |
77.4 |
83.9 |
| beta-1,3-galactosyltransferase-like protein | HC | chr2:32365851-32361195 | 20130731 |
| Soybean |
Glyma20g09170.1 |
188 |
72.1 |
82.0 |
|
| LJGI |
gnl|LJGI|AV776288 |
613 |
97.9 |
97.9 |
similar to UniRef100_Q9MAH2 Cluster: F12M16.19; n=1; Arabidopsis thaliana|Rep: F12M16.19 - Arabidopsis thaliana (Mouse-ear cress), partial (43%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj3g3v1061180.1 |
length: 184 aa. |
| IPR002659 |
Glycosyl transferase, family 31 |
| method |
AccNumber |
shortName |
E-value |
location |
| Biological Process |
GO:0006486 |
protein glycosylation |
|
|
| Molecular Function |
GO:0008378 |
galactosyltransferase activity |
|
|
| Cellular Component |
GO:0016020 |
membrane |
|
|
| HMMPanther |
PTHR11214 |
BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASET[5-167] |
2.9e-51 |
|
| HMMPfam |
PF01762 |
Galactosyl_T |
2.1e-14 |
98-169 |
| no_ID |
|
| HMMPanther |
PTHR11214:SF4 |
BETA |
2.9e-51 |
5-167 |
| Seg |
seg |
seg |
NA |
27-45 |
- Wolf-PSORT
Lj3g3v1061180.1 chlo 4.5, vacu 4, chlo_mito 3.5, mito 1.5, nucl 1, cyto 1, plas 1, extr 1, cyto_nucl 1, nucl_plas 1, cyto_plas 1
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj3g3v1061180.1 |
|