Miyakogusa Predicted Gene

Lj3g3v1059090.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr3
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL D3GBU8_LOTJA 1505 91.8 91.8 (tr|D3GBU8) Auxin response factor 4 OS=Lotus japonicus GN=ARF4 PE=2 SV=1
TAIR_pep AT5G60450.1 830 58.1 71.3 | Symbols: ARF4 | auxin response factor 4 | chr5:24308558-24312187 REVERSE LENGTH=788
Medicago Medtr2g093740.1 1264 76.4 82.8 | auxin response factor-like protein | HC | chr2:39984806-39979874 | 20130731
Soybean Glyma12g29280.3 1345 81.5 87.8  
LJGI gnl|LJGI|FS350751 458 87.7 87.7 similar to UniRef100_Q2HSV9 Cluster: Transcriptional factor B3; Auxin response factor; Aux/IAA_ARF_dimerisation; n=1; Medicago truncatula|Rep: Transcriptional factor B3; Auxin response factor; Aux/IAA_ARF_dimerisation - Medicago truncatula (Barrel medic), partial (17%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj3g3v1059090.1 length: 794 aa.
IPR003311 AUX/IAA protein
method AccNumber shortName E-value location
Cellular Component GO:0005634 nucleus    
Biological Process GO:0006355 regulation of transcription, DNA-dependent    
HMMPfam PF02309 AUX_IAA 4.3e-23 659-755
IPR003340 B3 DNA binding domain
Molecular Function GO:0003677 DNA binding    
Biological Process GO:0006355 regulation of transcription, DNA-dependent    
HMMPfam PF02362 B3 4.2e-23 156-254
HMMSmart SM01019 B3 1.8e-24 156-255
ProfileScan PS50863 B3 13.422 156-255
IPR010525 Auxin response factor
Molecular Function GO:0003677 DNA binding    
Cellular Component GO:0005634 nucleus    
Biological Process GO:0006355 regulation of transcription, DNA-dependent    
Biological Process GO:0009725 response to hormone stimulus    
HMMPfam PF06507 Auxin_resp 3.8e-34 279-361
IPR011525 Aux/IAA-ARF-dimerisation
Molecular Function GO:0046983 protein dimerization activity    
ProfileScan PS50962 IAA_ARF 28.593 667-749
IPR015300 DNA-binding pseudobarrel domain
Gene3D G3DSA:2.40.330.10 no description 8.4e-38 149-264
superfamily SSF101936 DNA-binding 1.2e-44 139-283
no_ID  
HMMPanther PTHR31384 FAMILY 3.4e-190 42-793
Seg seg seg NA 25-41
superfamily SSF54277 CAD 4e-10 654-746
Wolf-PSORT
Lj3g3v1059090.1	nucl 13
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj3g3v1059090.1