Miyakogusa Predicted Gene

Lj3g3v0807670.2
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr3
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1KFP9_SOYBN 1055 85.8 91.0 (tr|I1KFP9) Uncharacterized protein OS=Glycine max PE=4 SV=2
TAIR_pep AT4G25230.2 798 65.1 79.0 | Symbols: RIN2 | RPM1 interacting protein 2 | chr4:12924446-12928671 FORWARD LENGTH=578
Medicago Medtr3g007760.1 1050 85.7 90.9 | E3 ubiquitin protein ligase RIN2 | HC | chr3:1166460-1173444 | 20130731
Soybean Glyma06g47400.1 1023 85.1 90.3  
LJGI gnl|LJGI|TC65546 1021 100.0 100.0 similar to UniRef100_A7Q4Z5 Cluster: Chromosome undetermined scaffold_51, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome undetermined scaffold_51, whole genome shotgun sequence - Vitis vinifera (Grape), partial (33%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj3g3v0807670.2 length: 590 aa.
IPR001841 Zinc finger, RING-type
method AccNumber shortName E-value location
Molecular Function GO:0005515 protein binding    
Molecular Function GO:0008270 zinc ion binding    
HMMPfam PF13639 zf-RING_2 4.5e-13 340-386
HMMSmart SM00184 Ring 3.2e-07 342-383
ProfileScan PS50089 ZF_RING_2 12.652 342-384
IPR003892 Ubiquitin system component Cue
Molecular Function GO:0005515 protein binding    
HMMPfam PF02845 CUE 6.1e-07 553-590
ProfileScan PS51140 CUE 13.435 550-590
IPR013083 Zinc finger, RING/FYVE/PHD-type
Gene3D G3DSA:3.30.40.10 no description 4.7e-14 339-395
no_ID  
HMMPanther PTHR12477 SYNOVIOLIN-RELATED 1.6e-191 1-464
HMMPanther PTHR12477:SF6 SYNOVIOLIN-RELATED 1.6e-191 1-464
superfamily SSF57850 RING/U-box 6.1e-19 316-390
Wolf-PSORT
Lj3g3v0807670.2	plas 8, golg 3, E.R. 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj3g3v0807670.2