Miyakogusa Predicted Gene
- Lj3g3v0602620.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr3
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
A0PBZ4_LOTJA |
1357 |
92.0 |
95.7 |
(tr|A0PBZ4) Phenylalanine ammonia-lyase OS=Lotus japonicus GN=LjPAL5 PE=2 SV=1 |
| TAIR_pep |
AT2G37040.1 |
1192 |
82.0 |
90.3 |
| Symbols: PAL1, ATPAL1 | PHE ammonia lyase 1 | chr2:15557602-15560237 REVERSE LENGTH=725 |
| Medicago |
Medtr1g064090.1 |
1274 |
86.9 |
91.8 |
| phenylalanine ammonia-lyase-like protein | HC | chr1:28188012-28183314 | 20130731 |
| Soybean |
Glyma03g33890.1 |
1299 |
89.4 |
93.8 |
|
| LJGI |
gnl|LJGI|TC64569 |
3850 |
98.2 |
98.2 |
homologue to UniRef100_A0PBZ4 Cluster: Phenylalanine ammonia-lyase; n=1; Lotus japonicus|Rep: Phenylalanine ammonia-lyase - Lotus japonicus, partial (97%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj3g3v0602620.1 |
length: 709 aa. |
| IPR001106 |
Aromatic amino acid lyase |
| method |
AccNumber |
shortName |
E-value |
location |
| Biological Process |
GO:0009058 |
biosynthetic process |
|
|
| Molecular Function |
GO:0016841 |
ammonia-lyase activity |
|
|
| HMMPfam |
PF00221 |
Lyase_aromatic |
1.6e-173 |
53-547 |
| IPR005922 |
Phenylalanine ammonia-lyase |
| Cellular Component |
GO:0005737 |
cytoplasm |
|
|
| Biological Process |
GO:0006559 |
L-phenylalanine catabolic process |
|
|
| Molecular Function |
GO:0016841 |
ammonia-lyase activity |
|
|
| HMMTigr |
TIGR01226 |
phe_am_lyase: |
0 |
22-704 |
| IPR008948 |
L-Aspartase-like |
| Molecular Function |
GO:0003824 |
catalytic activity |
|
|
| superfamily |
SSF48557 |
L-aspartase-like |
1.1e-266 |
21-709 |
| IPR022313 |
Phenylalanine/histidine ammonia-lyases, active site |
| Molecular Function |
GO:0016841 |
ammonia-lyase activity |
|
|
| PatternScan |
PS00488 |
PAL_HISTIDASE |
NA |
197-213 |
| IPR023144 |
Phenylalanine ammonia-lyase, shielding domain |
| Gene3D |
G3DSA:1.10.274.20 |
no description |
3.9e-59 |
534-649 |
| IPR024083 |
Fumarase/histidase, N-terminal |
| Gene3D |
G3DSA:1.10.275.10 |
no description |
4.2e-93 |
21-260 |
| no_ID |
|
| Gene3D |
G3DSA:1.20.200.10 |
no description |
1.1e-138 |
650-704 |
| HMMPanther |
PTHR32364 |
FAMILY |
0 |
5-709 |
| HMMPanther |
PTHR32364:SF2 |
SUBFAMILY |
0 |
5-709 |
| Seg |
seg |
seg |
NA |
665-675 |
- Wolf-PSORT
Lj3g3v0602620.1 chlo 4, E.R. 3, cyto 2, plas 2, E.R._vacu 2, cyto_plas 2
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj3g3v0602620.1 |
|