Miyakogusa Predicted Gene

Lj3g3v0489450.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr3
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL K7LWM2_SOYBN 443 85.5 92.3 (tr|K7LWM2) Uncharacterized protein (Fragment) OS=Glycine max PE=4 SV=1
TAIR_pep AT3G63530.2 292 55.9 71.0 | Symbols: BB, BB2 | RING/U-box superfamily protein | chr3:23456407-23457787 REVERSE LENGTH=248
Medicago Medtr8g037150.1 443 84.7 92.3 | E3 ubiquitin ligase BIG brother-like protein | HC | chr8:13713285-13707137 | 20130731
Soybean Glyma13g27330.2 443 85.5 91.9  
LJGI gnl|LJGI|TC58281 69.9 84.2 84.2 similar to UniRef100_A7NZS6 Cluster: Chromosome chr6 scaffold_3, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr6 scaffold_3, whole genome shotgun sequence - Vitis vinifera (Grape), partial (62%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj3g3v0489450.1 length: 246 aa.
IPR001841 Zinc finger, RING-type
method AccNumber shortName E-value location
Molecular Function GO:0005515 protein binding    
Molecular Function GO:0008270 zinc ion binding    
HMMPfam PF13639 zf-RING_2 4.9e-14 194-236
HMMSmart SM00184 Ring 4.6e-05 195-235
ProfileScan PS50089 ZF_RING_2 11.781 195-236
IPR013083 Zinc finger, RING/FYVE/PHD-type
Gene3D G3DSA:3.30.40.10 no description 4.3e-15 190-239
no_ID  
HMMPanther PTHR14155 RING 5.7e-62 131-245
HMMPanther PTHR14155:SF16 SUBFAMILY 5.7e-62 131-245
superfamily SSF57850 RING/U-box 1.5e-16 188-239
Wolf-PSORT
Lj3g3v0489450.1	nucl 10, chlo 2, plas 1, extr 1, chlo_mito 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj3g3v0489450.1