Miyakogusa Predicted Gene

Lj3g3v0429510.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr3
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I3SLI5_LOTJA 542 92.5 92.5 (tr|I3SLI5) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1
TAIR_pep AT3G15290.1 417 73.2 83.5 | Symbols: | 3-hydroxyacyl-CoA dehydrogenase family protein | chr3:5145054-5146613 FORWARD LENGTH=294
Medicago Medtr8g061230.1 469 81.2 86.2 | 3-hydroxyacyl-CoA dehyrogenase | HC | chr8:21056770-21061794 | 20130731
Soybean Glyma06g39750.2 478 80.2 85.7  
LJGI gnl|LJGI|TC68387 1748 100.0 100.0 similar to UniRef100_A7P1Q8 Cluster: Chromosome chr19 scaffold_4, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr19 scaffold_4, whole genome shotgun sequence - Vitis vinifera (Grape), partial (96%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj3g3v0429510.1 length: 292 aa.
IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal
method AccNumber shortName E-value location
Molecular Function GO:0003857 3-hydroxyacyl-CoA dehydrogenase activity    
Biological Process GO:0006631 fatty acid metabolic process    
Molecular Function GO:0016491 oxidoreductase activity    
Biological Process GO:0055114 oxidation-reduction process    
HMMPfam PF00725 3HCDH 4.8e-35 189-285
IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding
Molecular Function GO:0003857 3-hydroxyacyl-CoA dehydrogenase activity    
Biological Process GO:0006631 fatty acid metabolic process    
Molecular Function GO:0016491 oxidoreductase activity    
Biological Process GO:0055114 oxidation-reduction process    
HMMPfam PF02737 3HCDH_N 2.5e-64 9-186
IPR006180 3-hydroxyacyl-CoA dehydrogenase, conserved site
Molecular Function GO:0003857 3-hydroxyacyl-CoA dehydrogenase activity    
Biological Process GO:0006631 fatty acid metabolic process    
Molecular Function GO:0016491 oxidoreductase activity    
Biological Process GO:0055114 oxidation-reduction process    
PatternScan PS00067 3HCDH NA 186-211
IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like
Biological Process GO:0055114 oxidation-reduction process    
superfamily SSF48179 6-phosphogluconate 6.5e-32 189-285
IPR013328 Dehydrogenase, multihelical
Molecular Function GO:0016491 oxidoreductase activity    
Molecular Function GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor    
Molecular Function GO:0050662 coenzyme binding    
Biological Process GO:0055114 oxidation-reduction process    
Gene3D G3DSA:1.10.1040.10 no description 2.7e-34 191-285
IPR016040 NAD(P)-binding domain
Gene3D G3DSA:3.40.50.720 no description 4.9e-64 4-190
no_ID  
HMMPanther PTHR23309 3-HYDROXYACYL-COA 3.6e-141 1-292
Seg seg seg NA 10-20
46-54
superfamily SSF51735 NAD(P)-binding 2.2e-58 3-188
Wolf-PSORT
Lj3g3v0429510.1	nucl 8, chlo 3, cyto 1, plas 1, pero 1, cyto_pero 1, cyto_plas 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj3g3v0429510.1