Miyakogusa Predicted Gene

Lj3g3v0381720.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr3
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL Q9SCA1_LOTJA 325 74.3 74.3 (tr|Q9SCA1) Calcium-binding protein OS=Lotus japonicus GN=cbp1 PE=2 SV=3
TAIR_pep AT3G07490.1 211 69.8 79.9 | Symbols: AGD11 | ARF-GAP domain 11 | chr3:2391189-2391650 FORWARD LENGTH=153
Medicago Medtr2g098890.1 244 59.1 63.8 | EF hand calcium-binding family protein | HC | chr2:42340482-42338936 | 20130731
Soybean Glyma15g03460.1 254 60.9 65.2  
LJGI gnl|LJGI|TC69344 1376 100.0 100.0 UniRef100_Q9SCA1 Cluster: Calcium-binding protein; n=1; Lotus japonicus|Rep: Calcium-binding protein - Lotus japonicus, complete
A list of protein families, domains and functional sites (searches in InterPro)
Lj3g3v0381720.1 length: 230 aa.
IPR002048 EF-hand domain
method AccNumber shortName E-value location
Molecular Function GO:0005509 calcium ion binding    
HMMSmart SM00054 EF-hand, 4.3e-05 85-113
121-149
158-186
196-224
ProfileScan PS50222 EF_HAND_2 15.546 81-116
117-152
154-189
192-227
IPR011992 EF-hand-like domain
Molecular Function GO:0005509 calcium ion binding    
Gene3D G3DSA:1.10.238.10 no description 2e-22 84-168
169-222
HMMPfam PF13499 EF_hand_5 2.7e-13 86-144
159-221
IPR018247 EF-Hand 1, calcium-binding site
PatternScan PS00018 EF_HAND_1 NA 94-106
130-142
167-179
205-217
no_ID  
HMMPanther PTHR10891 EF-HAND 8.4e-106 1-227
HMMPanther PTHR10891:SF141CALCIUM-BINDING PROTEIN 8.4e-106 1-227
Seg seg seg NA 9-22
42-52
63-74
150-161
204-213
superfamily SSF47473 EF-hand 2.6e-44 65-221
Wolf-PSORT
Lj3g3v0381720.1	chlo 11, nucl 1, mito 1, extr 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj3g3v0381720.1