Miyakogusa Predicted Gene

Lj3g3v0323530.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr3
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I3SKR0_LOTJA 652 99.7 100.0 (tr|I3SKR0) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1
TAIR_pep AT3G13920.1 592 90.2 96.2 | Symbols: EIF4A1, RH4, TIF4A1 | eukaryotic translation initiation factor 4A1 | chr3:4592635-4594128 REVERSE LENGTH=412
Medicago Medtr8g018400.1 622 95.2 97.1 | DEAD-box ATP-dependent RNA helicase | HC | chr8:6253262-6248871 | 20130731
Soybean Glyma15g03020.1 630 95.9 98.4  
LJGI gnl|LJGI|TC59447 1867 100.0 100.0 homologue to UniRef100_P41382 Cluster: Eukaryotic initiation factor 4A-10; n=1; Nicotiana tabacum|Rep: Eukaryotic initiation factor 4A-10 - Nicotiana tabacum (Common tobacco), complete
A list of protein families, domains and functional sites (searches in InterPro)
Lj3g3v0323530.1 length: 314 aa.
IPR000629 RNA helicase, ATP-dependent, DEAD-box, conserved site
method AccNumber shortName E-value location
Molecular Function GO:0003676 nucleic acid binding    
Molecular Function GO:0005524 ATP binding    
Molecular Function GO:0008026 ATP-dependent helicase activity    
PatternScan PS00039 DEAD_ATP_HELICASE NA 187-195
IPR001650 Helicase, C-terminal
Molecular Function GO:0003676 nucleic acid binding    
Molecular Function GO:0004386 helicase activity    
Molecular Function GO:0005524 ATP binding    
ProfileScan PS51194 HELICASE_CTER 6.974 252-314
IPR011545 DNA/RNA helicase, DEAD/DEAH box type, N-terminal
Molecular Function GO:0003676 nucleic acid binding    
Molecular Function GO:0005524 ATP binding    
Molecular Function GO:0008026 ATP-dependent helicase activity    
HMMPfam PF00270 DEAD 1.4e-39 65-226
IPR014001 Helicase, superfamily 1/2, ATP-binding domain
HMMSmart SM00487 DEAD-like 4e-54 59-256
ProfileScan PS51192 HELICASE_ATP_BIND_1 28.699 71-241
IPR014014 RNA helicase, DEAD-box type, Q motif
ProfileScan PS51195 Q_MOTIF 10.913 40-68
IPR027417 P-loop containing nucleoside triphosphate hydrolase
superfamily SSF52540 P-loop 4e-14 29-245
218-314
no_ID  
Gene3D G3DSA:3.40.50.300 no description 2.7e-12 37-246
247-314
HMMPanther PTHR24031 FAMILY 2.7e-211 35-314
HMMPanther PTHR24031:SF84 SUBFAMILY 2.7e-211 35-314
Wolf-PSORT
Lj3g3v0323530.1	cyto 10, pero 2, nucl 1, extr 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj3g3v0323530.1