Miyakogusa Predicted Gene
- Lj3g3v0290170.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr3
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
B9RQD6_RICCO |
84.0 |
66.1 |
71.0 |
(tr|B9RQD6) Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1488550 PE=4 SV=1 |
| TAIR_pep |
AT3G16490.1 |
79.7 |
67.7 |
72.6 |
| Symbols: IQD26 | IQ-domain 26 | chr3:5603962-5605489 REVERSE LENGTH=389 |
| Medicago |
Medtr8g014580.2 |
78.2 |
62.9 |
69.4 |
| IQ calmodulin-binding motif protein | HC | chr8:4607760-4610787 | 20130731 |
| Soybean |
Glyma07g01760.1 |
82.4 |
66.1 |
71.0 |
|
| LJGI |
--No_Hits--
|
|
|
|
|
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj3g3v0290170.1 |
length: 91 aa. |
| IPR000048 |
IQ motif, EF-hand binding site |
| method |
AccNumber |
shortName |
E-value |
location |
| Molecular Function |
GO:0005515 |
protein binding |
|
|
| HMMPfam |
PF00612 |
IQ |
0.00025 |
41-55 |
| ProfileScan |
PS50096 |
IQ |
9.176 |
38-65 |
| no_ID |
|
| HMMPanther |
PTHR32547 |
IQD |
9.9e-23 |
30-88 |
| HMMPanther |
PTHR32547:SF0 |
IQD |
9.9e-23 |
30-88 |
| Seg |
seg |
seg |
NA |
68-81 |
- Wolf-PSORT
Lj3g3v0290170.1 extr 6, chlo 4, mito 2, E.R. 2
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj3g3v0290170.1 |
|