Miyakogusa Predicted Gene

Lj3g3v0201940.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr3
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL K7MPA0_SOYBN 1291 83.0 89.2 (tr|K7MPA0) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT1G24330.1 971 63.3 77.2 | Symbols: | ARM repeat superfamily protein | chr1:8631779-8634835 FORWARD LENGTH=771
Medicago Medtr3g085610.1 1266 81.2 87.5 | plant U-box protein | HC | chr3:38705951-38710797 | 20130731
Soybean Glyma18g01180.1 1286 83.0 89.2  
LJGI gnl|LJGI|TC69482 831 99.8 99.8 similar to UniRef100_A7QBN6 Cluster: Chromosome chr1 scaffold_75, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr1 scaffold_75, whole genome shotgun sequence - Vitis vinifera (Grape), partial (17%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj3g3v0201940.1 length: 768 aa.
IPR000225 Armadillo
method AccNumber shortName E-value location
Molecular Function GO:0005515 protein binding    
HMMSmart SM00185 Armadillo/beta-catenin-like 4.8 457-501
542-583
ProfileScan PS50176 ARM_REPEAT 8.732 468-514
IPR003613 U box domain
Cellular Component GO:0000151 ubiquitin ligase complex    
Molecular Function GO:0004842 ubiquitin-protein ligase activity    
Biological Process GO:0016567 protein ubiquitination    
HMMPfam PF04564 U-box 2.4e-19 283-352
HMMSmart SM00504 Modified 2.2e-34 285-348
IPR011989 Armadillo-like helical
Gene3D G3DSA:1.25.10.10 no description 3.1e-35 420-709
IPR013083 Zinc finger, RING/FYVE/PHD-type
Gene3D G3DSA:3.30.40.10 no description 1.8e-30 282-353
IPR016024 Armadillo-type fold
Molecular Function GO:0005488 binding    
superfamily SSF48371 ARM 6.8e-26 427-707
no_ID  
HMMPanther PTHR22849 WDSAM1 3.5e-108 6-714
HMMPfam PF05804 KAP 2.2e-05 458-603
Seg seg seg NA 450-459
superfamily SSF57850 RING/U-box 7.5e-28 264-361
Wolf-PSORT
Lj3g3v0201940.1	nucl 12, cyto 1, cysk 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj3g3v0201940.1