Miyakogusa Predicted Gene

Lj3g3v0044250.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr3
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL K7M8S6_SOYBN 900 66.3 74.3 (tr|K7M8S6) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT3G42170.1 476 37.6 53.7 | Symbols: | BED zinc finger ;hAT family dimerisation domain | chr3:14321838-14323928 FORWARD LENGTH=696
Medicago Medtr4g036325.1 68.2 36.7 57.1 | hypothetical protein | LC | chr4:13081348-13082899 | 20130731
Soybean Glyma07g03280.1 782 58.9 69.1  
LJGI gnl|LJGI|TC59211 1298 100.0 100.0 weakly similar to UniRef100_A7PF89 Cluster: Chromosome chr11 scaffold_13, whole genome shotgun sequence; n=2; Vitis vinifera|Rep: Chromosome chr11 scaffold_13, whole genome shotgun sequence - Vitis vinifera (Grape), partial (26%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj3g3v0044250.1 length: 680 aa.
IPR003656 Zinc finger, BED-type predicted
method AccNumber shortName E-value location
Molecular Function GO:0003677 DNA binding    
HMMPfam PF02892 zf-BED 7.9e-08 20-68
HMMSmart SM00614 BED 4.6e-14 15-71
ProfileScan PS50808 ZF_BED 11.639 15-75
IPR008906 HAT dimerisation
Molecular Function GO:0046983 protein dimerization activity    
HMMPfam PF05699 Dimer_Tnp_hAT 4.7e-23 580-662
IPR012337 Ribonuclease H-like domain
Molecular Function GO:0003676 nucleic acid binding    
superfamily SSF53098 Ribonuclease 1.7e-59 157-667
IPR025525 Domain of unknown function DUF4413
HMMPfam PF14372 DUF4413 5e-24 397-495
no_ID  
HMMPanther PTHR10775 UNCHARACTERIZED 5.5e-93 1-680
HMMPanther PTHR10775:SF11 SUBFAMILY 5.5e-93 1-680
Seg seg seg NA 85-95
297-312
313-331
579-591
superfamily SSF57667 C2H2 1.1e-07 18-78
Wolf-PSORT
Lj3g3v0044250.1	nucl 11, cyto 3
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj3g3v0044250.1