| database | Accession | Score | Iden (%) |
Posi (%) |
Definition |
|---|---|---|---|---|---|
| TrEMBL | G7JQM0_MEDTR | 397 | 72.8 | 86.4 | (tr|G7JQM0) Pentatricopeptide repeat-containing protein OS=Medicago truncatula GN=MTR_4g076540 PE=4 SV=1 |
| TAIR_pep | AT3G54980.1 | 250 | 48.8 | 69.0 | | Symbols: | Pentatricopeptide repeat (PPR) superfamily protein | chr3:20370293-20372848 FORWARD LENGTH=851 |
| Medicago | Medtr4g076540.1 | 397 | 72.8 | 86.4 | | PPR containing plant-like protein | HC | chr4:29271058-29274509 | 20130731 |
| Soybean | Glyma07g07440.1 | 380 | 71.1 | 84.8 | |
| LJGI | --No_Hits-- |
| Lj2g3v3337810.1 | length: 268 aa. | |||
| IPR002885 | Pentatricopeptide repeat | |||
|---|---|---|---|---|
| method | AccNumber | shortName | E-value | location |
| HMMPfam | PF01535 | PPR | 1.8e-05 | 20-49 |
| HMMPfam | PF12854 | PPR_1 | 5.8e-07 | 156-183 |
| HMMPfam | PF13041 | PPR_2 | 2.4e-15 | 52-97 190-239 |
| HMMTigr | TIGR00756 | PPR: | 3.1e-07 | 20-52 57-88 89-123 158-191 193-227 229-256 |
| ProfileScan | PS51375 | PPR | 10.402 | 17-51 1-16 52-86 87-121 156-190 122-152 191-225 226-260 |
| IPR011990 | Tetratricopeptide-like helical | |||
| Molecular Function | GO:0005515 | protein binding | ||
| Gene3D | G3DSA:1.25.40.10 | no description | 7.9e-07 | 58-257 |
| no_ID | ||||
| HMMPanther | PTHR24015 | FAMILY | 6.4e-74 | 2-254 |
| HMMPanther | PTHR24015:SF0 | SUBFAMILY | 6.4e-74 | 2-254 |
| superfamily | SSF81901 | HCP-like | 1.6e-07 | 66-259 |
Lj2g3v3337810.1 cyto 9, pero 2, nucl 1.5, cysk_nucl 1.5
| entry_id | prediction | score | sppta | spptna | fp | profile |
|---|---|---|---|---|---|---|
| Lj2g3v3337810.1 |