Miyakogusa Predicted Gene
- Lj2g3v3281260.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr2
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
G7K4N2_MEDTR |
256 |
86.0 |
94.1 |
(tr|G7K4N2) Pectinesterase OS=Medicago truncatula GN=MTR_5g095490 PE=3 SV=1 |
| TAIR_pep |
AT5G55590.1 |
202 |
65.0 |
81.8 |
| Symbols: QRT1 | Pectin lyase-like superfamily protein | chr5:22519911-22521699 FORWARD LENGTH=380 |
| Medicago |
Medtr5g095490.1 |
256 |
86.0 |
94.1 |
| pectinesterase | HC | chr5:41736379-41738796 | 20130731 |
| Soybean |
Glyma14g01820.1 |
238 |
80.1 |
90.4 |
|
| LJGI |
gnl|LJGI|GO015023 |
287 |
83.9 |
83.9 |
weakly similar to UniRef100_A9STS3 Cluster: Predicted protein; n=1; Physcomitrella patens subsp. patens|Rep: Predicted protein - Physcomitrella patens subsp. patens, partial (41%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj2g3v3281260.1 |
length: 138 aa. |
| IPR000070 |
Pectinesterase, catalytic |
| method |
AccNumber |
shortName |
E-value |
location |
| Cellular Component |
GO:0005618 |
cell wall |
|
|
| Molecular Function |
GO:0030599 |
pectinesterase activity |
|
|
| Biological Process |
GO:0042545 |
cell wall modification |
|
|
| HMMPfam |
PF01095 |
Pectinesterase |
1.1e-36 |
2-133 |
| IPR011050 |
Pectin lyase fold/virulence factor |
| superfamily |
SSF51126 |
Pectin |
3.7e-34 |
2-131 |
| IPR012334 |
Pectin lyase fold |
| Gene3D |
G3DSA:2.160.20.10 |
no description |
1e-52 |
2-136 |
| no_ID |
|
| HMMPanther |
PTHR31321 |
FAMILY |
6.4e-68 |
1-138 |
| HMMPanther |
PTHR31321:SF0 |
SUBFAMILY |
6.4e-68 |
1-138 |
- Wolf-PSORT
Lj2g3v3281260.1 cyto 5.5, cyto_nucl 4.5, mito 3, nucl 2.5, extr 2
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj2g3v3281260.1 |
|