Miyakogusa Predicted Gene
- Lj2g3v3163950.2
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr2
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
I3T4E6_LOTJA |
431 |
99.0 |
99.5 |
(tr|I3T4E6) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1 |
| TAIR_pep |
AT1G50670.1 |
365 |
81.2 |
89.9 |
| Symbols: | OTU-like cysteine protease family protein | chr1:18775086-18776552 REVERSE LENGTH=208 |
| Medicago |
Medtr5g092720.1 |
408 |
91.8 |
95.7 |
| OTU-like cysteine protease | HC | chr5:40500904-40496811 | 20130731 |
| Soybean |
Glyma02g46040.1 |
397 |
89.4 |
94.2 |
|
| LJGI |
gnl|LJGI|TC65994 |
1243 |
100.0 |
100.0 |
similar to UniRef100_A9RFF7 Cluster: Predicted protein; n=1; Physcomitrella patens subsp. patens|Rep: Predicted protein - Physcomitrella patens subsp. patens, partial (92%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj2g3v3163950.2 |
length: 208 aa. |
| IPR003323 |
Ovarian tumour, otubain |
| method |
AccNumber |
shortName |
E-value |
location |
| HMMPfam |
PF02338 |
OTU |
5.6e-16 |
11-120 |
| ProfileScan |
PS50802 |
OTU |
10.657 |
5-127 |
| no_ID |
|
| HMMPanther |
PTHR13312 |
HIV-INDUCED |
5e-109 |
1-207 |
| HMMPanther |
PTHR13312:SF0 |
SUBFAMILY |
5e-109 |
1-207 |
| superfamily |
SSF54001 |
Cysteine |
3.2e-15 |
8-125 |
- Wolf-PSORT
Lj2g3v3163950.2 cyto 8, plas 4, cyto_nucl 4, cyto_pero 4, cyto_E.R. 4
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj2g3v3163950.2 |
|