Miyakogusa Predicted Gene

Lj2g3v2877210.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr2
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL G7KH86_MEDTR 363 72.2 82.1 (tr|G7KH86) Zinc finger CCCH domain-containing protein OS=Medicago truncatula GN=MTR_5g085200 PE=4 SV=1
TAIR_pep AT1G04990.1 150 42.1 55.0 | Symbols: | Zinc finger C-x8-C-x5-C-x3-H type family protein | chr1:1419368-1421454 REVERSE LENGTH=404
Medicago Medtr5g085200.1 363 72.2 82.1 | zinc finger CCCH domain protein | HC | chr5:36776743-36772884 | 20130731
Soybean Glyma02g43510.1 362 72.5 80.1  
LJGI gnl|LJGI|TC70274 753 100.0 100.0 similar to UniRef100_A7PXA0 Cluster: Chromosome chr12 scaffold_36, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr12 scaffold_36, whole genome shotgun sequence - Vitis vinifera (Grape), partial (14%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj2g3v2877210.1 length: 263 aa.
IPR000571 Zinc finger, CCCH-type
method AccNumber shortName E-value location
Molecular Function GO:0003676 nucleic acid binding    
Molecular Function GO:0008270 zinc ion binding    
Gene3D G3DSA:4.10.1000.10 no description 8.3e-06 134-155
HMMPfam PF00642 zf-CCCH 7.8e-09 1-18
130-155
172-197
HMMSmart SM00356 zinc 2.5e-06 1-18
128-155
171-198
ProfileScan PS50103 ZF_C3H1 13.629 1-19
128-156
171-199
no_ID  
HMMPanther PTHR12506 PROTEIN 3.3e-60 1-262
HMMPanther PTHR12506:SF11 ZINC 3.3e-60 1-262
Seg seg seg NA 63-77
252-260
superfamily SSF90229 CCCH 0.018 123-162
166-205
1-25
Wolf-PSORT
Lj2g3v2877210.1	chlo 7, nucl 4, mito 3
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj2g3v2877210.1 Not targeted -59.192 0 -20.181 87.82% -39.010