Miyakogusa Predicted Gene
- Lj2g3v2599880.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr2
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
G7KBS2_MEDTR |
362 |
75.8 |
82.5 |
(tr|G7KBS2) Ribosomal RNA large subunit methyltransferase E OS=Medicago truncatula GN=MTR_5g080020 PE=4 SV=1 |
| TAIR_pep |
AT5G13830.1 |
317 |
66.5 |
78.7 |
| Symbols: | FtsJ-like methyltransferase family protein | chr5:4467363-4468487 FORWARD LENGTH=224 |
| Medicago |
Medtr5g080020.1 |
362 |
75.8 |
82.5 |
| ribosomal RNA large subunit methyltransferase | HC | chr5:34249444-34252337 | 20130731 |
| Soybean |
Glyma14g07350.1 |
337 |
71.8 |
78.8 |
|
| LJGI |
gnl|LJGI|BW596757 |
777 |
99.7 |
99.7 |
similar to UniRef100_A7PIS8 Cluster: Chromosome chr13 scaffold_17, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr13 scaffold_17, whole genome shotgun sequence - Vitis vinifera (Grape), partial (43%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj2g3v2599880.1 |
length: 241 aa. |
| IPR002877 |
Ribosomal RNA methyltransferase FtsJ domain |
| method |
AccNumber |
shortName |
E-value |
location |
| Molecular Function |
GO:0008168 |
methyltransferase activity |
|
|
| Biological Process |
GO:0032259 |
methylation |
|
|
| HMMPfam |
PF01728 |
FtsJ |
1.3e-44 |
19-234 |
| IPR015507 |
Ribosomal RNA large subunit methyltransferase E |
| Biological Process |
GO:0001510 |
RNA methylation |
|
|
| Molecular Function |
GO:0008168 |
methyltransferase activity |
|
|
| HAMAP |
MF_01547 |
23SrRNA_methyltr_E |
25.485 |
3-236 |
| HMMPanther |
PTHR10920 |
RIBOSOMAL |
3.4e-67 |
8-241 |
| no_ID |
|
| Gene3D |
G3DSA:3.40.50.150 |
no description |
2.1e-48 |
180-236 |
| HMMPanther |
PTHR10920:SF11 |
RIBOSOMAL |
3.4e-67 |
8-241 |
| Seg |
seg |
seg |
NA |
150-163 |
| superfamily |
SSF53335 |
S-adenosyl-L-methionine-dependent |
6.6e-23 |
8-237 |
- Wolf-PSORT
Lj2g3v2599880.1 cyto 7, chlo 3, nucl 2, extr 1, vacu 1, cysk_nucl 1, nucl_plas 1
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj2g3v2599880.1 |
|