Miyakogusa Predicted Gene
- Lj2g3v2088460.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr2
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
I1K693_SOYBN |
256 |
92.2 |
96.9 |
(tr|I1K693) Uncharacterized protein OS=Glycine max PE=3 SV=1 |
| TAIR_pep |
AT5G42080.3 |
237 |
83.7 |
93.0 |
| Symbols: DL1 | dynamin-like protein | chr5:16820661-16824536 REVERSE LENGTH=604 |
| Medicago |
Medtr8g099550.1 |
247 |
89.1 |
93.8 |
| dynamin-like protein 1E | HC | chr8:42036981-42044826 | 20130731 |
| Soybean |
Glyma05g36840.1 |
256 |
92.2 |
96.9 |
|
| LJGI |
gnl|LJGI|TC61120 |
779 |
100.0 |
100.0 |
homologue to UniRef100_Q39828 Cluster: SDL5A; n=1; Glycine max|Rep: SDL5A - Glycine max (Soybean), partial (37%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj2g3v2088460.1 |
length: 129 aa. |
| IPR003130 |
Dynamin GTPase effector |
| method |
AccNumber |
shortName |
E-value |
location |
| Molecular Function |
GO:0003924 |
GTPase activity |
|
|
| Molecular Function |
GO:0005525 |
GTP binding |
|
|
| HMMPfam |
PF02212 |
GED |
1.4e-19 |
34-125 |
| HMMSmart |
SM00302 |
Dynamin |
2.3e-34 |
32-125 |
| IPR020850 |
GTPase effector domain, GED |
| ProfileScan |
PS51388 |
GED |
18.418 |
37-129 |
| IPR022812 |
Dynamin |
| HMMPanther |
PTHR11566 |
DYNAMIN |
6.4e-22 |
16-129 |
| no_ID |
|
| HMMPanther |
PTHR11566:SF12 |
DYNAMIN |
6.4e-22 |
16-129 |
- Wolf-PSORT
Lj2g3v2088460.1 cyto 6, chlo 3, cyto_pero 3, cyto_E.R. 3, cyto_plas 3
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj2g3v2088460.1 |
|