| database | Accession | Score | Iden (%) |
Posi (%) |
Definition |
|---|---|---|---|---|---|
| TrEMBL | K7LML1_SOYBN | 1711 | 75.0 | 83.0 | (tr|K7LML1) Uncharacterized protein OS=Glycine max PE=4 SV=1 |
| TAIR_pep | AT4G11110.1 | 919 | 48.1 | 62.9 | | Symbols: SPA2 | SPA1-related 2 | chr4:6772163-6776675 FORWARD LENGTH=1036 |
| Medicago | Medtr5g009530.5 | 1540 | 71.6 | 79.3 | | ubiquitin ligase cop1, putative | HC | chr5:2302327-2311929 | 20130731 |
| Soybean | Glyma11g02110.1 | 1542 | 72.8 | 79.9 | |
| LJGI | gnl|LJGI|TC73999 | 65.9 | 87.7 | 87.7 | similar to UniRef100_A7P1N6 Cluster: Chromosome chr19 scaffold_4, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr19 scaffold_4, whole genome shotgun sequence - Vitis vinifera (Grape), partial (23%) |
| Lj2g3v2088010.1 | length: 1075 aa. | |||
| IPR001680 | WD40 repeat | |||
|---|---|---|---|---|
| method | AccNumber | shortName | E-value | location |
| Molecular Function | GO:0005515 | protein binding | ||
| HMMPfam | PF00400 | WD40 | 5e-07 | 812-840 848-883 934-967 |
| HMMSmart | SM00320 | WD40 | 12 | 746-790 800-840 843-883 886-925 929-967 978-1017 1033-1073 |
| ProfileScan | PS50082 | WD_REPEATS_2 | 13.717 | 807-849 850-892 936-976 |
| IPR011009 | Protein kinase-like domain | |||
| Molecular Function | GO:0016772 | transferase activity, transferring phosphorus-containing groups | ||
| superfamily | SSF56112 | Protein | 7.5e-09 | 302-568 |
| IPR015943 | WD40/YVTN repeat-like-containing domain | |||
| Molecular Function | GO:0005515 | protein binding | ||
| Gene3D | G3DSA:2.130.10.10 | no description | 1.3e-54 | 756-1074 |
| IPR017986 | WD40-repeat-containing domain | |||
| Molecular Function | GO:0005515 | protein binding | ||
| ProfileScan | PS50294 | WD_REPEATS_REGION | 25.048 | 758-976 |
| superfamily | SSF50978 | WD40 | 3.1e-50 | 762-1074 |
| IPR019775 | WD40 repeat, conserved site | |||
| PatternScan | PS00678 | WD_REPEATS_1 | NA | 827-841 954-968 |
| IPR020472 | G-protein beta WD-40 repeat | |||
| FPrintScan | PR00320 | GPROTEINBRPT | 4e-06 | 827-841 870-884 954-968 |
| no_ID | ||||
| Coil | coil | coiled-coil | NA | 599-627 |
| Gene3D | G3DSA:1.10.510.10 | no description | 8.2e-07 | 475-583 |
| HMMPanther | PTHR22847 | WD40 | 1.6e-214 | 478-1074 |
| HMMPanther | PTHR22847:SF14 | UBIQUITIN | 1.6e-214 | 478-1074 |
Lj2g3v2088010.1 nucl 13
| entry_id | prediction | score | sppta | spptna | fp | profile |
|---|---|---|---|---|---|---|
| Lj2g3v2088010.1 |