Miyakogusa Predicted Gene
- Lj2g3v2087660.4
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr2
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
G7KAP1_MEDTR |
331 |
91.4 |
94.3 |
(tr|G7KAP1) Apospory-associated protein C OS=Medicago truncatula GN=MTR_5g009670 PE=4 SV=1 |
| TAIR_pep |
AT4G23730.1 |
301 |
78.9 |
92.6 |
| Symbols: | Galactose mutarotase-like superfamily protein | chr4:12362955-12364792 FORWARD LENGTH=306 |
| Medicago |
Medtr5g009670.1 |
331 |
91.4 |
94.3 |
| glucose-6-phosphate 1-epimerase-like protein | HC | chr5:2391698-2388291 | 20130731 |
| Soybean |
Glyma01g43330.1 |
307 |
86.5 |
92.4 |
|
| LJGI |
gnl|LJGI|TC77379 |
628 |
100.0 |
100.0 |
similar to UniRef100_A7PZR3 Cluster: Chromosome chr15 scaffold_40, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr15 scaffold_40, whole genome shotgun sequence - Vitis vinifera (Grape), partial (33%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj2g3v2087660.4 |
length: 175 aa. |
| IPR008183 |
Aldose 1-/Glucose-6-phosphate 1-epimerase |
| method |
AccNumber |
shortName |
E-value |
location |
| Biological Process |
GO:0005975 |
carbohydrate metabolic process |
|
|
| Molecular Function |
GO:0016853 |
isomerase activity |
|
|
| HMMPfam |
PF01263 |
Aldose_epim |
4.6e-40 |
4-169 |
| IPR011013 |
Galactose mutarotase-like domain |
| Molecular Function |
GO:0003824 |
catalytic activity |
|
|
| Biological Process |
GO:0005975 |
carbohydrate metabolic process |
|
|
| Molecular Function |
GO:0030246 |
carbohydrate binding |
|
|
| superfamily |
SSF74650 |
Galactose |
2.8e-40 |
2-170 |
| IPR014718 |
Glycoside hydrolase-type carbohydrate-binding, subgroup |
| Molecular Function |
GO:0003824 |
catalytic activity |
|
|
| Biological Process |
GO:0005975 |
carbohydrate metabolic process |
|
|
| Molecular Function |
GO:0030246 |
carbohydrate binding |
|
|
| Gene3D |
G3DSA:2.70.98.10 |
no description |
4.6e-60 |
2-171 |
| no_ID |
|
| HMMPanther |
PTHR11122 |
APOSPORY-ASSOCIATED |
6.8e-88 |
1-175 |
| HMMPanther |
PTHR11122:SF9 |
SUBFAMILY |
6.8e-88 |
1-175 |
- Wolf-PSORT
Lj2g3v2087660.4 cyto 6.5, cyto_nucl 4, chlo 3, mito 1, plas 1, extr 1, golg 1, golg_plas 1, mito_plas 1
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj2g3v2087660.4 |
|