Miyakogusa Predicted Gene
- Lj2g3v2028890.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr2
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
I1JFH6_SOYBN |
114 |
77.3 |
87.9 |
(tr|I1JFH6) Uncharacterized protein OS=Glycine max PE=4 SV=1 |
| TAIR_pep |
AT2G47750.1 |
101 |
65.2 |
83.3 |
| Symbols: GH3.9 | putative indole-3-acetic acid-amido synthetase GH3.9 | chr2:19560307-19562974 REVERSE LENGTH=585 |
| Medicago |
Medtr1g088765.1 |
110 |
75.8 |
86.4 |
| indole-3-acetic acid-amido synthetase | HC | chr1:39743073-39746516 | 20130731 |
| Soybean |
Glyma10g02440.1 |
115 |
78.8 |
89.4 |
|
| LJGI |
--No_Hits--
|
|
|
|
|
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj2g3v2028890.1 |
length: 67 aa. |
| IPR004993 |
GH3 auxin-responsive promoter |
| method |
AccNumber |
shortName |
E-value |
location |
| HMMPfam |
PF03321 |
GH3 |
1.5e-13 |
7-65 |
| no_ID |
|
| HMMPanther |
PTHR31901 |
FAMILY |
2.1e-21 |
1-66 |
| HMMPanther |
PTHR31901:SF0 |
SUBFAMILY |
2.1e-21 |
1-66 |
- Wolf-PSORT
Lj2g3v2028890.1 chlo 5, nucl 4, cyto 3, extr 2, cysk_nucl 2, nucl_plas 2
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj2g3v2028890.1 |
|