Miyakogusa Predicted Gene
- Lj2g3v2002600.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr2
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
I1LGL2_SOYBN |
1196 |
85.8 |
93.7 |
(tr|I1LGL2) Uncharacterized protein OS=Glycine max PE=4 SV=1 |
| TAIR_pep |
AT1G12360.1 |
1038 |
76.1 |
87.7 |
| Symbols: KEU | Sec1/munc18-like (SM) proteins superfamily | chr1:4201172-4206144 FORWARD LENGTH=666 |
| Medicago |
Medtr5g011790.1 |
1169 |
84.8 |
92.0 |
| SNARE-interacting KEULE-like protein | HC | chr5:3449752-3441379 | 20130731 |
| Soybean |
Glyma11g03230.1 |
1196 |
85.8 |
93.7 |
|
| LJGI |
gnl|LJGI|TC64134 |
1423 |
100.0 |
100.0 |
similar to UniRef100_Q9C5X3 Cluster: SNARE-interacting protein KEULE; n=1; Arabidopsis thaliana|Rep: SNARE-interacting protein KEULE - Arabidopsis thaliana (Mouse-ear cress), partial (35%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj2g3v2002600.1 |
length: 663 aa. |
| IPR001619 |
Sec1-like protein |
| method |
AccNumber |
shortName |
E-value |
location |
| Biological Process |
GO:0006904 |
vesicle docking involved in exocytosis |
|
|
| Biological Process |
GO:0016192 |
vesicle-mediated transport |
|
|
| HMMPanther |
PTHR11679 |
VESICLE |
0 |
1-663 |
| HMMPfam |
PF00995 |
Sec1 |
1.2e-129 |
44-648 |
| superfamily |
SSF56815 |
Sec1/munc18-like |
9.3e-153 |
15-654 |
| IPR027482 |
Sec1-like, domain 2 |
| Gene3D |
G3DSA:3.40.50.1910 |
no description |
1.7e-68 |
601-653 |
| no_ID |
|
| Coil |
coil |
coiled-coil |
NA |
49-70 |
| Gene3D |
G3DSA:1.25.40.60 |
no description |
6.8e-13 |
397-519 |
| Gene3D |
G3DSA:3.40.50.2060 |
no description |
1.5e-46 |
12-151 |
| HMMPanther |
PTHR11679:SF5 |
PLANT |
0 |
1-663 |
| Seg |
seg |
seg |
NA |
1-10 |
- Wolf-PSORT
Lj2g3v2002600.1 cyto 6, nucl 4, chlo 1, extr 1, pero 1, cysk 1
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj2g3v2002600.1 |
|