Miyakogusa Predicted Gene

Lj2g3v2001600.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr2
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL G7JW40_MEDTR 542 77.1 87.3 (tr|G7JW40) Matrix metalloproteinase-28 OS=Medicago truncatula GN=MTR_5g012680 PE=4 SV=1
TAIR_pep AT4G16640.1 354 55.9 69.1 | Symbols: | Matrixin family protein | chr4:9367396-9368490 REVERSE LENGTH=364
Medicago Medtr5g012680.1 542 77.1 87.3 | matrix metalloproteinase | HC | chr5:3865811-3864354 | 20130731
Soybean Glyma11g03630.1 540 80.7 87.9  
LJGI gnl|LJGI|BW631970 737 100.0 100.0 weakly similar to UniRef100_Q0IVR7 Cluster: Os10g0557900 protein; n=3; Oryza sativa|Rep: Os10g0557900 protein - Oryza sativa subsp. japonica (Rice), partial (22%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj2g3v2001600.1 length: 362 aa.
IPR001818 Peptidase M10, metallopeptidase
method AccNumber shortName E-value location
Molecular Function GO:0004222 metalloendopeptidase activity    
Biological Process GO:0006508 proteolysis    
Molecular Function GO:0008270 zinc ion binding    
Cellular Component GO:0031012 extracellular matrix    
HMMPfam PF00413 Peptidase_M10 5e-48 162-317
IPR002477 Peptidoglycan binding-like
HMMPfam PF01471 PG_binding_1 1.6e-10 68-123
superfamily SSF47090 PGBD-like 3.8e-16 54-135
IPR006026 Peptidase, metallopeptidase
Biological Process GO:0006508 proteolysis    
Molecular Function GO:0008237 metallopeptidase activity    
Molecular Function GO:0008270 zinc ion binding    
HMMSmart SM00235 Zinc-dependent 4.9e-44 151-318
IPR021190 Peptidase M10A
Molecular Function GO:0004222 metalloendopeptidase activity    
Biological Process GO:0006508 proteolysis    
Molecular Function GO:0008270 zinc ion binding    
Cellular Component GO:0031012 extracellular matrix    
FPrintScan PR00138 MATRIXIN 1.9e-36 124-137
185-200
209-237
270-295
304-317
IPR024079 Metallopeptidase, catalytic domain
Molecular Function GO:0008237 metallopeptidase activity    
Gene3D G3DSA:3.40.390.10 no description 7.2e-71 62-321
no_ID  
HMMPanther PTHR10201 MATRIX 9.9e-133 28-322
HMMPanther PTHR10201:SF15 MATRIX 9.9e-133 28-322
Seg seg seg NA 5-22
134-137
356-360
superfamily SSF55486 Metalloproteases 1e-45 155-317
Wolf-PSORT
Lj2g3v2001600.1	plas 8, chlo 2, vacu 2, E.R. 2, E.R._vacu 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj2g3v2001600.1