Miyakogusa Predicted Gene

Lj2g3v1828900.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr2
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1LHI2_SOYBN 1118 76.0 84.5 (tr|I1LHI2) Uncharacterized protein OS=Glycine max PE=4 SV=2
TAIR_pep AT3G50420.1 716 51.3 69.4 | Symbols: | Pentatricopeptide repeat (PPR) superfamily protein | chr3:18710871-18713649 REVERSE LENGTH=794
Medicago Medtr5g018370.1 1071 73.1 82.9 | PPR containing plant-like protein | HC | chr5:6845861-6848150 | 20130731
Soybean Glyma11g06340.1 1067 77.5 86.3  
LJGI --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
Lj2g3v1828900.1 length: 713 aa.
IPR002885 Pentatricopeptide repeat
method AccNumber shortName E-value location
HMMPfam PF01535 PPR 0.7 48-75
253-276
281-308
383-408
457-477
HMMPfam PF13041 PPR_2 7.4e-11 77-122
178-225
482-529
HMMTigr TIGR00756 PPR: 2.9e-08 180-213
252-276
485-517
ProfileScan PS51375 PPR 6.401 76-111
45-75
178-212
147-177
213-247
248-282
283-313
381-415
482-516
451-481
517-551
619-653
IPR011990 Tetratricopeptide-like helical
Molecular Function GO:0005515 protein binding    
Gene3D G3DSA:1.25.40.10 no description 0.00025 581-639
no_ID  
Coil coil coiled-coil NA 679-700
HMMPanther PTHR24015 FAMILY 1.6e-262 30-693
HMMPanther PTHR24015:SF85 SUBFAMILY 1.6e-262 30-693
Seg seg seg NA 29-40
562-573
Wolf-PSORT
Lj2g3v1828900.1	chlo 12, mito 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj2g3v1828900.1