Miyakogusa Predicted Gene

Lj2g3v1757070.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr2
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL C6TDZ3_SOYBN 244 45.3 52.1 (tr|C6TDZ3) Putative uncharacterized protein OS=Glycine max PE=2 SV=1
TAIR_pep AT2G18350.1 164 45.1 57.7 | Symbols: AtHB24, HB24, ZHD6 | homeobox protein 24 | chr2:7971122-7971910 REVERSE LENGTH=262
Medicago Medtr5g020510.1 219 54.9 64.8 | homeobox domain, ZF-HD class protein | HC | chr5:7836628-7838042 | 20130731
Soybean Glyma11g07360.1 244 45.0 51.9  
LJGI gnl|LJGI|BW607624 793 100.0 100.0 similar to UniRef100_A7PUT9 Cluster: Chromosome chr4 scaffold_32, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr4 scaffold_32, whole genome shotgun sequence - Vitis vinifera (Grape), partial (28%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj2g3v1757070.1 length: 338 aa.
IPR006455 Homeodomain, ZF-HD class
method AccNumber shortName E-value location
HMMTigr TIGR01565 homeo_ZF_HD: 5e-27 273-330
IPR006456 ZF-HD homeobox protein, Cys/His-rich dimerisation domain
BlastProDom PD125774 Q9M9S0_ARATH_Q9M9S0; 1e-19 130-184
HMMPfam PF04770 ZF-HD_dimer 1.7e-29 130-184
HMMTigr TIGR01566 ZF_HD_prot_N: 7e-28 131-181
ProfileScan PS51523 ZF_HD_DIMER 26.012 132-180
IPR009057 Homeodomain-like
Molecular Function GO:0003677 DNA binding    
Gene3D G3DSA:1.10.10.60 no description 9.6e-27 263-334
superfamily SSF46689 Homeodomain-like 6.2e-20 257-336
no_ID  
HMMPanther PTHR31948 FAMILY 2e-74 64-334
HMMPanther PTHR31948:SF0 SUBFAMILY 2e-74 64-334
Seg seg seg NA 32-41
72-88
99-129
203-215
224-239
245-254
Wolf-PSORT
Lj2g3v1757070.1	nucl 14
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj2g3v1757070.1