Miyakogusa Predicted Gene
- Lj2g3v1468200.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr2
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
I3SD28_LOTJA |
688 |
96.5 |
96.8 |
(tr|I3SD28) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1 |
| TAIR_pep |
AT2G22670.4 |
404 |
67.7 |
77.3 |
| Symbols: IAA8 | indoleacetic acid-induced protein 8 | chr2:9636877-9638459 FORWARD LENGTH=338 |
| Medicago |
Medtr5g030710.2 |
537 |
77.4 |
83.3 |
| auxin-responsive AUX/IAA family protein | HC | chr5:13126019-13120497 | 20130731 |
| Soybean |
Glyma01g02350.3 |
574 |
80.9 |
86.7 |
|
| LJGI |
gnl|LJGI|TC74104 |
2076 |
100.0 |
100.0 |
similar to UniRef100_A9YWR0 Cluster: GH1 protein; n=1; Medicago truncatula|Rep: GH1 protein - Medicago truncatula (Barrel medic), partial (87%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj2g3v1468200.1 |
length: 347 aa. |
| IPR003311 |
AUX/IAA protein |
| method |
AccNumber |
shortName |
E-value |
location |
| Cellular Component |
GO:0005634 |
nucleus |
|
|
| Biological Process |
GO:0006355 |
regulation of transcription, DNA-dependent |
|
|
| HMMPfam |
PF02309 |
AUX_IAA |
1.7e-86 |
66-339 |
| IPR011525 |
Aux/IAA-ARF-dimerisation |
| Molecular Function |
GO:0046983 |
protein dimerization activity |
|
|
| ProfileScan |
PS50962 |
IAA_ARF |
30.830 |
228-330 |
| no_ID |
|
| HMMPanther |
PTHR31734 |
FAMILY |
5.6e-113 |
30-347 |
| Seg |
seg |
seg |
NA |
17-27 |
| superfamily |
SSF54277 |
CAD |
1.3e-20 |
215-328 |
- Wolf-PSORT
Lj2g3v1468200.1 cyto 6, chlo 3, nucl 3, cyto_E.R. 3, cyto_plas 3
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj2g3v1468200.1 |
|