Miyakogusa Predicted Gene

Lj2g3v1280050.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr2
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1KXS9_SOYBN 1242 88.3 94.6 (tr|I1KXS9) Uncharacterized protein OS=Glycine max PE=3 SV=1
TAIR_pep AT1G26830.1 1115 78.2 90.1 | Symbols: CUL3A, ATCUL3A, ATCUL3, CUL3 | cullin 3 | chr1:9296063-9298374 FORWARD LENGTH=732
Medicago Medtr8g056030.1 1227 87.8 94.3 | cullin 3B | HC | chr8:24400972-24393862 | 20130731
Soybean Glyma08g41130.1 1242 88.3 94.6  
LJGI gnl|LJGI|TC76803 1189 99.4 99.4 similar to UniRef100_A7QEF5 Cluster: Chromosome chr1 scaffold_84, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr1 scaffold_84, whole genome shotgun sequence - Vitis vinifera (Grape), partial (36%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj2g3v1280050.1 length: 667 aa.
IPR001373 Cullin, N-terminal
method AccNumber shortName E-value location
Biological Process GO:0006511 ubiquitin-dependent protein catabolic process    
Cellular Component GO:0031461 cullin-RING ubiquitin ligase complex    
Molecular Function GO:0031625 ubiquitin protein ligase binding    
HMMPfam PF00888 Cullin 9.3e-185 29-630
IPR011991 Winged helix-turn-helix DNA-binding domain
Gene3D G3DSA:1.10.10.10 no description 8.5e-19 561-629
IPR016158 Cullin homology
Biological Process GO:0006511 ubiquitin-dependent protein catabolic process    
Cellular Component GO:0031461 cullin-RING ubiquitin ligase complex    
Molecular Function GO:0031625 ubiquitin protein ligase binding    
HMMSmart SM00182 Cullin 2.7e-69 404-550
ProfileScan PS50069 CULLIN_2 56.539 374-601
superfamily SSF75632 Cullin 1.7e-96 368-641
IPR016159 Cullin repeat-like-containing domain
superfamily SSF74788 Cullin 6.5e-111 25-376
no_ID  
Gene3D G3DSA:1.20.1310.10 no description 1.6e-43 26-147
150-265
269-377
378-480
Gene3D G3DSA:4.10.1030.10 no description 6e-26 490-554
HMMPanther PTHR11932 CULLIN 4.1e-289 1-665
HMMPanther PTHR11932:SF23 CULLIN 4.1e-289 1-665
Wolf-PSORT
Lj2g3v1280050.1	cyto 6, mito 2, plas 2, mito_plas 2, chlo 1, nucl 1, pero 1, cysk 1, cyto_mito 1, cysk_nucl 1, golg_plas 1, E.R._plas 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj2g3v1280050.1