Miyakogusa Predicted Gene

Lj2g3v1277760.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr2
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL G7KGL1_MEDTR 880 79.1 88.0 (tr|G7KGL1) (R)-mandelonitrile lyase OS=Medicago truncatula GN=MTR_5g041340 PE=3 SV=1
TAIR_pep AT1G14185.1 610 59.8 77.2 | Symbols: | Glucose-methanol-choline (GMC) oxidoreductase family protein | chr1:4850284-4851885 FORWARD LENGTH=503
Medicago Medtr5g041340.1 880 79.1 88.0 | glucose-methanol-choline (GMC) oxidoreductase family protein | HC | chr5:18165160-18162244 | 20130731
Soybean Glyma01g05890.1 856 81.5 91.9  
LJGI gnl|LJGI|TC74394 904 100.0 100.0 similar to UniRef100_A7PC60 Cluster: Chromosome chr2 scaffold_11, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr2 scaffold_11, whole genome shotgun sequence - Vitis vinifera (Grape), partial (17%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj2g3v1277760.1 length: 533 aa.
IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal
method AccNumber shortName E-value location
Molecular Function GO:0016614 oxidoreductase activity, acting on CH-OH group of donors    
Molecular Function GO:0050660 flavin adenine dinucleotide binding    
Biological Process GO:0055114 oxidation-reduction process    
HMMPfam PF00732 GMC_oxred_N 1.2e-18 52-149
218-336
PatternScan PS00623 GMC_OXRED_1 NA 125-148
PatternScan PS00624 GMC_OXRED_2 NA 294-308
IPR007867 Glucose-methanol-choline oxidoreductase, C-terminal
Molecular Function GO:0016614 oxidoreductase activity, acting on CH-OH group of donors    
Biological Process GO:0055114 oxidation-reduction process    
HMMPfam PF05199 GMC_oxred_C 7.7e-30 389-517
IPR012132 Glucose-methanol-choline oxidoreductase
Biological Process GO:0006066 alcohol metabolic process    
Molecular Function GO:0008812 choline dehydrogenase activity    
Molecular Function GO:0016614 oxidoreductase activity, acting on CH-OH group of donors    
Molecular Function GO:0050660 flavin adenine dinucleotide binding    
Biological Process GO:0055114 oxidation-reduction process    
HMMPIR PIRSF000137 Alcohol 3.4e-88 1-532
no_ID  
Gene3D G3DSA:3.50.50.60 no description 1.1e-90 468-531
HMMPanther PTHR11552 GLUCOSE-METHANOL-CHOLINE 2.2e-174 13-533
HMMPanther PTHR11552:SF14 SUBFAMILY 2.2e-174 13-533
Seg seg seg NA 13-28
119-130
superfamily SSF51905 FAD/NAD(P)-binding 3.8e-49 50-529
superfamily SSF54373 FAD-linked 3.1e-23 330-474
Wolf-PSORT
Lj2g3v1277760.1	cyto 5, chlo 3, nucl 3, mito 1, extr 1, vacu 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj2g3v1277760.1