Miyakogusa Predicted Gene

Lj2g3v1119540.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr2
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I3STN7_LOTJA 448 94.8 94.8 (tr|I3STN7) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1
TAIR_pep AT5G15790.2 265 58.0 69.3 | Symbols: | RING/U-box superfamily protein | chr5:5149800-5150964 FORWARD LENGTH=232
Medicago Medtr6g015980.1 386 79.9 87.8 | RING-finger ubiquitin ligase | HC | chr6:5667096-5661021 | 20130731
Soybean Glyma19g04340.1 393 80.3 88.2  
LJGI gnl|LJGI|TC60485 1368 100.0 100.0 similar to UniRef100_A7PAE6 Cluster: Chromosome chr14 scaffold_9, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr14 scaffold_9, whole genome shotgun sequence - Vitis vinifera (Grape), complete
A list of protein families, domains and functional sites (searches in InterPro)
Lj2g3v1119540.1 length: 229 aa.
IPR001841 Zinc finger, RING-type
method AccNumber shortName E-value location
Molecular Function GO:0005515 protein binding    
Molecular Function GO:0008270 zinc ion binding    
HMMPfam PF13639 zf-RING_2 4.9e-12 176-218
HMMSmart SM00184 Ring 1.2e-06 177-217
ProfileScan PS50089 ZF_RING_2 11.958 177-217
IPR013083 Zinc finger, RING/FYVE/PHD-type
Gene3D G3DSA:3.30.40.10 no description 3.5e-14 172-223
no_ID  
HMMPanther PTHR22766 RING 1.8e-78 7-225
HMMPanther PTHR22766:SF29 SUBFAMILY 1.8e-78 7-225
Seg seg seg NA 65-76
superfamily SSF57850 RING/U-box 1.6e-17 170-224
Wolf-PSORT
Lj2g3v1119540.1	nucl 8, extr 5
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj2g3v1119540.1