Miyakogusa Predicted Gene

Lj2g3v0609610.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr2
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL A5BUG6_VITVI 163 51.0 67.1 (tr|A5BUG6) Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_005638 PE=4 SV=1
TAIR_pep ATMG00300.1 58.2 35.3 57.6 | Symbols: ORF145A | Gag-Pol-related retrotransposon family protein | chrM:89617-90054 REVERSE LENGTH=145
Medicago --No_Hits--        
Soybean Glyma16g09250.1 150 49.7 67.1  
LJGI gnl|LJGI|TC82428 658 100.0 100.0  
A list of protein families, domains and functional sites (searches in InterPro)
Lj2g3v0609610.1 length: 223 aa.
IPR001584 Integrase, catalytic core
method AccNumber shortName E-value location
Biological Process GO:0015074 DNA integration    
HMMPfam PF00665 rve 5e-17 131-222
ProfileScan PS50994 INTEGRASE 12.709 129-223
IPR012337 Ribonuclease H-like domain
Molecular Function GO:0003676 nucleic acid binding    
superfamily SSF53098 Ribonuclease 1e-15 126-222
IPR025724 GAG-pre-integrase domain
HMMPfam PF13976 gag_pre-integrs 9.8e-11 64-118
no_ID  
Gene3D G3DSA:3.30.420.10 no description 2.8e-09 129-219
HMMPanther PTHR11439 GAG-POL-RELATED 3.9e-47 68-210
HMMPanther PTHR11439:SF127PREDICTED PROTEIN 3.9e-47 68-210
Seg seg seg NA 39-65
Wolf-PSORT
Lj2g3v0609610.1	nucl 8, chlo 2, cyto 2, extr 1, pero 1, chlo_mito 1, cyto_E.R. 1, cyto_plas 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj2g3v0609610.1